Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.83■□□□□ 0.6
SHDQ96IW2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SHDQ96IW2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SHDQ96IW2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHDQ96IW2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.82■□□□□ 0.6
SHDQ96IW2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.82■□□□□ 0.6
SHDQ96IW2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.82■□□□□ 0.6
SHDQ96IW2 AC073648.2-201ENST00000510116 352 ntBASIC18.82■□□□□ 0.6
SHDQ96IW2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.82■□□□□ 0.6
SHDQ96IW2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.82■□□□□ 0.6
SHDQ96IW2 AC139887.3-201ENST00000568585 713 ntBASIC18.82■□□□□ 0.6
SHDQ96IW2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.82■□□□□ 0.6
SHDQ96IW2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.82■□□□□ 0.6
SHDQ96IW2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
SHDQ96IW2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SHDQ96IW2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.82■□□□□ 0.6
SHDQ96IW2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.82■□□□□ 0.6
SHDQ96IW2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.82■□□□□ 0.6
SHDQ96IW2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHDQ96IW2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.81■□□□□ 0.6
SHDQ96IW2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.81■□□□□ 0.6
SHDQ96IW2 RPL13AP23-201ENST00000480739 586 ntBASIC18.81■□□□□ 0.6
SHDQ96IW2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 AC091607.1-201ENST00000490318 1060 ntBASIC18.81■□□□□ 0.6
SHDQ96IW2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.81■□□□□ 0.6
SHDQ96IW2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.81■□□□□ 0.6
SHDQ96IW2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.81■□□□□ 0.6
SHDQ96IW2 AC114341.1-201ENST00000618070 349 ntBASIC18.81■□□□□ 0.6
SHDQ96IW2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.81■□□□□ 0.6
SHDQ96IW2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SHDQ96IW2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
SHDQ96IW2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHDQ96IW2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SHDQ96IW2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.8■□□□□ 0.6
SHDQ96IW2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.8■□□□□ 0.6
SHDQ96IW2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SHDQ96IW2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.8■□□□□ 0.6
SHDQ96IW2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.8■□□□□ 0.6
SHDQ96IW2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SHDQ96IW2 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.8■□□□□ 0.6
SHDQ96IW2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.8■□□□□ 0.6
SHDQ96IW2 AC096582.2-201ENST00000510860 516 ntBASIC18.8■□□□□ 0.6
SHDQ96IW2 BNIP3P18-201ENST00000593976 575 ntBASIC18.8■□□□□ 0.6
SHDQ96IW2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.8■□□□□ 0.6
SHDQ96IW2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.8■□□□□ 0.6
SHDQ96IW2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHDQ96IW2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SHDQ96IW2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.79■□□□□ 0.6
SHDQ96IW2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHDQ96IW2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 MIR940-201ENST00000401276 94 ntBASIC18.79■□□□□ 0.6
SHDQ96IW2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC132008.2-207ENST00000454517 770 ntBASIC18.79■□□□□ 0.6
SHDQ96IW2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.79■□□□□ 0.6
SHDQ96IW2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.79■□□□□ 0.6
SHDQ96IW2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC148477.8-201ENST00000624298 468 ntBASIC18.79■□□□□ 0.6
SHDQ96IW2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SHDQ96IW2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SHDQ96IW2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SHDQ96IW2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms