Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.66■□□□□ 0.74
SMARCD1Q96GM5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 RASA4DP-201ENST00000460726 1199 ntBASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCD1Q96GM5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCD1Q96GM5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCD1Q96GM5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCD1Q96GM5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.64■□□□□ 0.74
SMARCD1Q96GM5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 KRT18P41-201ENST00000518924 1277 ntBASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCD1Q96GM5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 AL671277.2-201ENST00000458060 996 ntBASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 MIR3917-201ENST00000580971 93 ntBASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 AC010240.3-201ENST00000607688 395 ntBASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCD1Q96GM5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 AC112907.2-201ENST00000448639 330 ntBASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms