Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Gm29257-201ENSMUST00000186115 639 ntBASIC13.33□□□□□ -0.28
Smim12Q78RX3 Gm37722-201ENSMUST00000193757 208 ntBASIC13.33□□□□□ -0.28
Smim12Q78RX3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.33□□□□□ -0.28
Smim12Q78RX3 Gm18959-201ENSMUST00000208954 655 ntBASIC13.33□□□□□ -0.28
Smim12Q78RX3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim12Q78RX3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.32□□□□□ -0.28
Smim12Q78RX3 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.32□□□□□ -0.28
Smim12Q78RX3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim12Q78RX3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.31□□□□□ -0.28
Smim12Q78RX3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim12Q78RX3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smim12Q78RX3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms