Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ4P56696 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
KCNQ4P56696 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ4P56696 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ4P56696 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
KCNQ4P56696 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
KCNQ4P56696 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 AC099343.3-201ENST00000605834 2503 ntBASIC23.76■■□□□ 1.39
KCNQ4P56696 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
KCNQ4P56696 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.76■■□□□ 1.39
KCNQ4P56696 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.76■■□□□ 1.39
KCNQ4P56696 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.76■■□□□ 1.39
KCNQ4P56696 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
KCNQ4P56696 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.76■■□□□ 1.39
KCNQ4P56696 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
KCNQ4P56696 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.76■■□□□ 1.39
KCNQ4P56696 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
KCNQ4P56696 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNQ4P56696 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 AC034236.2-201ENST00000606662 1610 ntBASIC23.75■■□□□ 1.39
KCNQ4P56696 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 RCN1P2-201ENST00000398357 915 ntBASIC23.75■■□□□ 1.39
KCNQ4P56696 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.75■■□□□ 1.39
KCNQ4P56696 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNQ4P56696 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNQ4P56696 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNQ4P56696 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
KCNQ4P56696 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
KCNQ4P56696 KRT8P32-201ENST00000512863 1461 ntBASIC23.75■■□□□ 1.39
KCNQ4P56696 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.75■■□□□ 1.39
KCNQ4P56696 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
KCNQ4P56696 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
KCNQ4P56696 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
KCNQ4P56696 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNQ4P56696 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNQ4P56696 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNQ4P56696 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.74■■□□□ 1.39
KCNQ4P56696 FGFR3P6-201ENST00000457012 610 ntBASIC23.74■■□□□ 1.39
KCNQ4P56696 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
KCNQ4P56696 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.74■■□□□ 1.39
KCNQ4P56696 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 ZNF259P1-201ENST00000407656 1365 ntBASIC23.74■■□□□ 1.39
KCNQ4P56696 LINC01521-201ENST00000504184 1943 ntBASIC23.74■■□□□ 1.39
KCNQ4P56696 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KCNQ4P56696 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.73■■□□□ 1.39
KCNQ4P56696 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
KCNQ4P56696 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.73■■□□□ 1.39
KCNQ4P56696 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.73■■□□□ 1.39
KCNQ4P56696 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.73■■□□□ 1.39
KCNQ4P56696 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.73■■□□□ 1.39
KCNQ4P56696 AC010327.4-202ENST00000591484 748 ntBASIC23.73■■□□□ 1.39
KCNQ4P56696 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
KCNQ4P56696 AC114341.1-201ENST00000618070 349 ntBASIC23.73■■□□□ 1.39
KCNQ4P56696 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
KCNQ4P56696 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.73■■□□□ 1.39
KCNQ4P56696 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.73■■□□□ 1.39
KCNQ4P56696 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
KCNQ4P56696 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KCNQ4P56696 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.73■■□□□ 1.39
KCNQ4P56696 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.72■■□□□ 1.39
KCNQ4P56696 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms