Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 AIRN-201ENST00000601203 4374 ntBASIC18.28■□□□□ 0.52
TAF4O00268 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TAF4O00268 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.28■□□□□ 0.52
TAF4O00268 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.28■□□□□ 0.52
TAF4O00268 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.28■□□□□ 0.52
TAF4O00268 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.28■□□□□ 0.52
TAF4O00268 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.28■□□□□ 0.52
TAF4O00268 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
TAF4O00268 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.28■□□□□ 0.52
TAF4O00268 SLC25A6P4-201ENST00000586535 553 ntBASIC18.28■□□□□ 0.52
TAF4O00268 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.28■□□□□ 0.52
TAF4O00268 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.28■□□□□ 0.52
TAF4O00268 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 TFP1-202ENST00000475455 1573 ntBASIC18.28■□□□□ 0.52
TAF4O00268 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TAF4O00268 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 AC016734.2-201ENST00000624325 1377 ntBASIC18.28■□□□□ 0.52
TAF4O00268 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
TAF4O00268 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TAF4O00268 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.27■□□□□ 0.52
TAF4O00268 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.27■□□□□ 0.52
TAF4O00268 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TAF4O00268 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TAF4O00268 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.27■□□□□ 0.52
TAF4O00268 AP002383.4-201ENST00000442518 975 ntBASIC18.27■□□□□ 0.52
TAF4O00268 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.27■□□□□ 0.52
TAF4O00268 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.27■□□□□ 0.52
TAF4O00268 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 AL732292.2-201ENST00000609649 430 ntBASIC18.27■□□□□ 0.52
TAF4O00268 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TAF4O00268 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TAF4O00268 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.27■□□□□ 0.52
TAF4O00268 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TAF4O00268 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TAF4O00268 TCF3P1-201ENST00000423021 1937 ntBASIC18.27■□□□□ 0.51
TAF4O00268 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TAF4O00268 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.26■□□□□ 0.51
TAF4O00268 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
TAF4O00268 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 AC121338.2-201ENST00000622535 1744 ntBASIC18.26■□□□□ 0.51
TAF4O00268 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TAF4O00268 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.26■□□□□ 0.51
TAF4O00268 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 CA15P1-201ENST00000481698 905 ntBASIC18.26■□□□□ 0.51
TAF4O00268 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 AC106795.1-205ENST00000512851 1056 ntBASIC18.26■□□□□ 0.51
TAF4O00268 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.26■□□□□ 0.51
TAF4O00268 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.26■□□□□ 0.51
TAF4O00268 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TAF4O00268 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.26■□□□□ 0.51
TAF4O00268 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.26■□□□□ 0.51
TAF4O00268 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TAF4O00268 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TAF4O00268 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 NEFHP1-201ENST00000412845 2629 ntBASIC18.25■□□□□ 0.51
TAF4O00268 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.25■□□□□ 0.51
TAF4O00268 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.25■□□□□ 0.51
TAF4O00268 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 AP000523.1-201ENST00000398242 1049 ntBASIC18.25■□□□□ 0.51
TAF4O00268 TSPY19P-201ENST00000418461 509 ntBASIC18.25■□□□□ 0.51
TAF4O00268 AL645929.1-201ENST00000420084 975 ntBASIC18.25■□□□□ 0.51
TAF4O00268 TSPY18P-201ENST00000441642 509 ntBASIC18.25■□□□□ 0.51
TAF4O00268 Z85996.1-201ENST00000494644 937 ntBASIC18.25■□□□□ 0.51
TAF4O00268 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.25■□□□□ 0.51
TAF4O00268 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
TAF4O00268 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TAF4O00268 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TAF4O00268 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TAF4O00268 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.25■□□□□ 0.51
TAF4O00268 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms