Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 BX276092.5-203ENST00000456199 560 ntBASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 AL136038.4-201ENST00000603606 1261 ntBASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 AC093484.2-201ENST00000580996 2166 ntBASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3FA6NER0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 AC034236.2-201ENST00000606662 1610 ntBASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 ATP5G2P1-201ENST00000433580 426 ntBASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 AC010240.3-201ENST00000607688 395 ntBASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3FA6NER0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 HLA-F-220ENST00000434407 884 ntBASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 AL121672.3-201ENST00000608644 468 ntBASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 AL162741.1-201ENST00000565563 1558 ntBASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.59■□□□□ 0.57
TBC1D3FA6NER0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 AC006333.2-201ENST00000607957 2099 ntBASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TBC1D3FA6NER0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 CLEC4GP1-201ENST00000596555 870 ntBASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 AC092119.3-201ENST00000612618 583 ntBASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TBC1D3FA6NER0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.57■□□□□ 0.56
TBC1D3FA6NER0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms