Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 KRT18P67-201ENST00000432816 1264 ntBASIC17.67■□□□□ 0.42
LHX6Q9UPM6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LHX6Q9UPM6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 AC092364.2-202ENST00000597012 1073 ntBASIC17.66■□□□□ 0.42
LHX6Q9UPM6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.66■□□□□ 0.42
LHX6Q9UPM6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 AC004967.1-201ENST00000453589 447 ntBASIC17.65■□□□□ 0.42
LHX6Q9UPM6 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 AL160286.2-201ENST00000567150 934 ntBASIC17.65■□□□□ 0.42
LHX6Q9UPM6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LHX6Q9UPM6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.64■□□□□ 0.42
LHX6Q9UPM6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
LHX6Q9UPM6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.64■□□□□ 0.42
LHX6Q9UPM6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LHX6Q9UPM6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LHX6Q9UPM6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 RPSAP43-201ENST00000402237 625 ntBASIC17.64■□□□□ 0.41
LHX6Q9UPM6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 AC009065.1-201ENST00000564055 1225 ntBASIC17.64■□□□□ 0.41
LHX6Q9UPM6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 MIR3687-2-201ENST00000577708 61 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms