Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 AC005104.2-201ENST00000427818 678 ntBASIC23.77■■□□□ 1.4
CCNL1Q9UK58 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 FAM215A-202ENST00000632077 792 ntBASIC23.77■■□□□ 1.4
CCNL1Q9UK58 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNL1Q9UK58 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNL1Q9UK58 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNL1Q9UK58 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.74■■□□□ 1.39
CCNL1Q9UK58 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.74■■□□□ 1.39
CCNL1Q9UK58 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 AL691403.2-201ENST00000618460 490 ntBASIC23.74■■□□□ 1.39
CCNL1Q9UK58 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNL1Q9UK58 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 AC092667.1-201ENST00000434301 2586 ntBASIC23.73■■□□□ 1.39
CCNL1Q9UK58 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 HNRNPDP1-201ENST00000439535 754 ntBASIC23.73■■□□□ 1.39
CCNL1Q9UK58 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 AL355877.3-201ENST00000622820 899 ntBASIC23.73■■□□□ 1.39
CCNL1Q9UK58 AC116407.3-201ENST00000623905 1129 ntBASIC23.73■■□□□ 1.39
CCNL1Q9UK58 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNL1Q9UK58 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms