Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.9■■□□□ 1.58
ABCA3Q99758 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.9■■□□□ 1.58
ABCA3Q99758 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 RPSAP43-201ENST00000402237 625 ntBASIC24.9■■□□□ 1.58
ABCA3Q99758 UPF3AP3-201ENST00000420996 769 ntBASIC24.9■■□□□ 1.58
ABCA3Q99758 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC24.9■■□□□ 1.58
ABCA3Q99758 AC022898.2-201ENST00000616822 1312 ntBASIC24.9■■□□□ 1.58
ABCA3Q99758 KRT8P50-201ENST00000562022 1438 ntBASIC24.9■■□□□ 1.58
ABCA3Q99758 KRT8P32-201ENST00000512863 1461 ntBASIC24.9■■□□□ 1.58
ABCA3Q99758 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
ABCA3Q99758 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ABCA3Q99758 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
ABCA3Q99758 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
ABCA3Q99758 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
ABCA3Q99758 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.89■■□□□ 1.58
ABCA3Q99758 AC012640.2-201ENST00000561606 901 ntBASIC24.89■■□□□ 1.58
ABCA3Q99758 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC24.89■■□□□ 1.58
ABCA3Q99758 AL591684.3-201ENST00000605187 298 ntBASIC24.89■■□□□ 1.58
ABCA3Q99758 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
ABCA3Q99758 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
ABCA3Q99758 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
ABCA3Q99758 MIR564-202ENST00000385049 94 ntBASIC24.89■■□□□ 1.57
ABCA3Q99758 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.89■■□□□ 1.57
ABCA3Q99758 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.89■■□□□ 1.57
ABCA3Q99758 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
ABCA3Q99758 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
ABCA3Q99758 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.88■■□□□ 1.57
ABCA3Q99758 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC24.88■■□□□ 1.57
ABCA3Q99758 YBX2P1-201ENST00000394192 760 ntBASIC24.88■■□□□ 1.57
ABCA3Q99758 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
ABCA3Q99758 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.88■■□□□ 1.57
ABCA3Q99758 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.88■■□□□ 1.57
ABCA3Q99758 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC24.88■■□□□ 1.57
ABCA3Q99758 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
ABCA3Q99758 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ABCA3Q99758 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.88■■□□□ 1.57
ABCA3Q99758 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
ABCA3Q99758 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.87■■□□□ 1.57
ABCA3Q99758 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.87■■□□□ 1.57
ABCA3Q99758 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 CD63-204ENST00000546939 779 ntTSL 3 BASIC24.87■■□□□ 1.57
ABCA3Q99758 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.87■■□□□ 1.57
ABCA3Q99758 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC24.87■■□□□ 1.57
ABCA3Q99758 FAM197Y3-203ENST00000618346 717 ntBASIC24.87■■□□□ 1.57
ABCA3Q99758 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.87■■□□□ 1.57
ABCA3Q99758 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.87■■□□□ 1.57
ABCA3Q99758 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
ABCA3Q99758 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.87■■□□□ 1.57
ABCA3Q99758 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
ABCA3Q99758 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.86■■□□□ 1.57
ABCA3Q99758 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 AP001160.2-201ENST00000596071 487 ntBASIC24.86■■□□□ 1.57
ABCA3Q99758 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
ABCA3Q99758 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.86■■□□□ 1.57
ABCA3Q99758 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 ZNF259P1-201ENST00000407656 1365 ntBASIC24.86■■□□□ 1.57
ABCA3Q99758 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
ABCA3Q99758 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 AC113404.2-201ENST00000507884 177 ntBASIC24.86■■□□□ 1.57
ABCA3Q99758 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC24.86■■□□□ 1.57
ABCA3Q99758 SART3-203ENST00000546611 1184 ntBASIC24.86■■□□□ 1.57
ABCA3Q99758 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC24.86■■□□□ 1.57
ABCA3Q99758 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC24.86■■□□□ 1.57
ABCA3Q99758 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ABCA3Q99758 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.85■■□□□ 1.57
ABCA3Q99758 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms