Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHDQ96IW2 AP005901.3-202ENST00000581653 237 ntBASIC18.87■□□□□ 0.61
SHDQ96IW2 AL391422.3-201ENST00000603791 2761 ntBASIC18.87■□□□□ 0.61
SHDQ96IW2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.87■□□□□ 0.61
SHDQ96IW2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.87■□□□□ 0.61
SHDQ96IW2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHDQ96IW2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHDQ96IW2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHDQ96IW2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHDQ96IW2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
SHDQ96IW2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.86■□□□□ 0.61
SHDQ96IW2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHDQ96IW2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SHDQ96IW2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.86■□□□□ 0.61
SHDQ96IW2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.86■□□□□ 0.61
SHDQ96IW2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.86■□□□□ 0.61
SHDQ96IW2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.86■□□□□ 0.61
SHDQ96IW2 MIR5100-201ENST00000579544 119 ntBASIC18.86■□□□□ 0.61
SHDQ96IW2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.86■□□□□ 0.61
SHDQ96IW2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SHDQ96IW2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHDQ96IW2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.85■□□□□ 0.61
SHDQ96IW2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 AC006333.2-201ENST00000607957 2099 ntBASIC18.85■□□□□ 0.61
SHDQ96IW2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 ZNF259P1-201ENST00000407656 1365 ntBASIC18.85■□□□□ 0.61
SHDQ96IW2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SHDQ96IW2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.85■□□□□ 0.61
SHDQ96IW2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 AC092183.1-201ENST00000469884 875 ntBASIC18.85■□□□□ 0.61
SHDQ96IW2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.85■□□□□ 0.61
SHDQ96IW2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHDQ96IW2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SHDQ96IW2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.85■□□□□ 0.61
SHDQ96IW2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
SHDQ96IW2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SHDQ96IW2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 BX842568.4-201ENST00000421222 227 ntBASIC18.84■□□□□ 0.61
SHDQ96IW2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
SHDQ96IW2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.84■□□□□ 0.61
SHDQ96IW2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.84■□□□□ 0.61
SHDQ96IW2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.84■□□□□ 0.61
SHDQ96IW2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.84■□□□□ 0.61
SHDQ96IW2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.84■□□□□ 0.61
SHDQ96IW2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.84■□□□□ 0.61
SHDQ96IW2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.84■□□□□ 0.61
SHDQ96IW2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 Z82202.1-201ENST00000623446 1880 ntBASIC18.84■□□□□ 0.61
SHDQ96IW2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHDQ96IW2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
SHDQ96IW2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHDQ96IW2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.83■□□□□ 0.61
SHDQ96IW2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHDQ96IW2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHDQ96IW2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHDQ96IW2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SHDQ96IW2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.83■□□□□ 0.61
SHDQ96IW2 RPS2P28-201ENST00000314255 741 ntBASIC18.83■□□□□ 0.6
SHDQ96IW2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.83■□□□□ 0.6
SHDQ96IW2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 POLD2P1-201ENST00000511220 997 ntBASIC18.83■□□□□ 0.6
SHDQ96IW2 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.83■□□□□ 0.6
SHDQ96IW2 AC008608.2-201ENST00000606089 416 ntBASIC18.83■□□□□ 0.6
SHDQ96IW2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 GABARAPL3-202ENST00000624044 1851 ntBASIC18.83■□□□□ 0.6
SHDQ96IW2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SHDQ96IW2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHDQ96IW2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.83■□□□□ 0.6
SHDQ96IW2 KRT8P32-201ENST00000512863 1461 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms