Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 KRT8P50-201ENST00000562022 1438 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 CCR12P-201ENST00000446203 998 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 WWOX-216ENST00000569818 525 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 MYC-208ENST00000641036 567 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 AC116562.4-202ENST00000641738 218 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.05■□□□□ 0.8
LMO3Q8TAP4 AC034236.2-201ENST00000606662 1610 ntBASIC20.05■□□□□ 0.8
LMO3Q8TAP4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 BX088651.1-201ENST00000540551 451 ntBASIC20.04■□□□□ 0.8
LMO3Q8TAP4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 AC010653.2-201ENST00000623505 997 ntBASIC20.04■□□□□ 0.8
LMO3Q8TAP4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
LMO3Q8TAP4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 AL354751.1-201ENST00000412768 1863 ntBASIC20.03■□□□□ 0.8
LMO3Q8TAP4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.03■□□□□ 0.8
LMO3Q8TAP4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.02■□□□□ 0.8
LMO3Q8TAP4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms