Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC27.7■■■□□ 2.02
ABCA6Q8N139 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
ABCA6Q8N139 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 AC140113.2-201ENST00000604370 208 ntBASIC27.7■■■□□ 2.02
ABCA6Q8N139 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ABCA6Q8N139 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC27.69■■■□□ 2.02
ABCA6Q8N139 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA6Q8N139 AC005104.2-201ENST00000427818 678 ntBASIC27.69■■■□□ 2.02
ABCA6Q8N139 REEP1-209ENST00000541910 969 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA6Q8N139 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ABCA6Q8N139 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC27.69■■■□□ 2.02
ABCA6Q8N139 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
ABCA6Q8N139 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 AC011840.4-201ENST00000578471 627 ntBASIC27.68■■■□□ 2.02
ABCA6Q8N139 AL591684.3-201ENST00000605187 298 ntBASIC27.68■■■□□ 2.02
ABCA6Q8N139 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
ABCA6Q8N139 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
ABCA6Q8N139 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC27.68■■■□□ 2.02
ABCA6Q8N139 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC27.68■■■□□ 2.02
ABCA6Q8N139 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
ABCA6Q8N139 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 PMS2P2-201ENST00000425039 1128 ntBASIC27.67■■■□□ 2.02
ABCA6Q8N139 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC27.67■■■□□ 2.02
ABCA6Q8N139 AL691403.2-201ENST00000618460 490 ntBASIC27.67■■■□□ 2.02
ABCA6Q8N139 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ABCA6Q8N139 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC27.66■■■□□ 2.02
ABCA6Q8N139 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
ABCA6Q8N139 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
ABCA6Q8N139 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 AC093909.1-201ENST00000504731 1122 ntBASIC27.66■■■□□ 2.02
ABCA6Q8N139 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 AC034105.1-201ENST00000563488 319 ntBASIC27.66■■■□□ 2.02
ABCA6Q8N139 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA6Q8N139 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ABCA6Q8N139 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC27.66■■■□□ 2.02
ABCA6Q8N139 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 HIST2H3DP1-201ENST00000401004 416 ntBASIC27.65■■■□□ 2.02
ABCA6Q8N139 NMU-202ENST00000505262 693 ntTSL 3 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 LBX2-AS1-202ENST00000603175 2083 ntBASIC27.65■■■□□ 2.02
ABCA6Q8N139 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ABCA6Q8N139 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC27.65■■■□□ 2.02
ABCA6Q8N139 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA6Q8N139 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA6Q8N139 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
ABCA6Q8N139 RBM17P3-201ENST00000417687 1192 ntBASIC27.64■■■□□ 2.02
ABCA6Q8N139 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
ABCA6Q8N139 THAP5-204ENST00000438865 868 ntTSL 2 BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms