Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMAD3P84022 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
SMAD3P84022 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMAD3P84022 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.18■□□□□ 0.82
SMAD3P84022 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.18■□□□□ 0.82
SMAD3P84022 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.18■□□□□ 0.82
SMAD3P84022 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.18■□□□□ 0.82
SMAD3P84022 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMAD3P84022 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
SMAD3P84022 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SMAD3P84022 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.17■□□□□ 0.82
SMAD3P84022 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.17■□□□□ 0.82
SMAD3P84022 KRT18P23-201ENST00000435622 1283 ntBASIC20.17■□□□□ 0.82
SMAD3P84022 MINOS1P3-201ENST00000457048 203 ntBASIC20.17■□□□□ 0.82
SMAD3P84022 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.17■□□□□ 0.82
SMAD3P84022 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.17■□□□□ 0.82
SMAD3P84022 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 AP005901.3-202ENST00000581653 237 ntBASIC20.17■□□□□ 0.82
SMAD3P84022 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.17■□□□□ 0.82
SMAD3P84022 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 AL049840.3-201ENST00000602669 611 ntBASIC20.17■□□□□ 0.82
SMAD3P84022 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.17■□□□□ 0.82
SMAD3P84022 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SMAD3P84022 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.17■□□□□ 0.82
SMAD3P84022 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMAD3P84022 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SMAD3P84022 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
SMAD3P84022 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 RPSAP43-201ENST00000402237 625 ntBASIC20.16■□□□□ 0.82
SMAD3P84022 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 AL591684.3-201ENST00000605187 298 ntBASIC20.16■□□□□ 0.82
SMAD3P84022 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMAD3P84022 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMAD3P84022 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMAD3P84022 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMAD3P84022 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.15■□□□□ 0.82
SMAD3P84022 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.15■□□□□ 0.82
SMAD3P84022 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SMAD3P84022 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.15■□□□□ 0.82
SMAD3P84022 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.15■□□□□ 0.82
SMAD3P84022 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.15■□□□□ 0.82
SMAD3P84022 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.15■□□□□ 0.82
SMAD3P84022 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.15■□□□□ 0.82
SMAD3P84022 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.15■□□□□ 0.82
SMAD3P84022 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.15■□□□□ 0.82
SMAD3P84022 AC027601.4-201ENST00000611259 610 ntBASIC20.15■□□□□ 0.82
SMAD3P84022 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 FAM215A-202ENST00000632077 792 ntBASIC20.15■□□□□ 0.82
SMAD3P84022 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.15■□□□□ 0.82
SMAD3P84022 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.15■□□□□ 0.82
SMAD3P84022 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.15■□□□□ 0.82
SMAD3P84022 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.15■□□□□ 0.82
SMAD3P84022 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.15■□□□□ 0.82
SMAD3P84022 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMAD3P84022 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMAD3P84022 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SMAD3P84022 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
SMAD3P84022 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms