Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL022342.1-201ENST00000400363 863 ntBASIC23.72■■□□□ 1.39
COL15A1P39059 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
COL15A1P39059 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.72■■□□□ 1.39
COL15A1P39059 AP003733.1-201ENST00000491725 852 ntBASIC23.72■■□□□ 1.39
COL15A1P39059 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC23.72■■□□□ 1.39
COL15A1P39059 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.72■■□□□ 1.39
COL15A1P39059 AC074051.2-201ENST00000565115 352 ntBASIC23.72■■□□□ 1.39
COL15A1P39059 SLC25A6P4-201ENST00000586535 553 ntBASIC23.72■■□□□ 1.39
COL15A1P39059 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.72■■□□□ 1.39
COL15A1P39059 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.72■■□□□ 1.39
COL15A1P39059 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL15A1P39059 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.72■■□□□ 1.39
COL15A1P39059 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
COL15A1P39059 LINC00167-201ENST00000530583 1419 ntBASIC23.71■■□□□ 1.39
COL15A1P39059 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
COL15A1P39059 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.71■■□□□ 1.39
COL15A1P39059 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC23.71■■□□□ 1.39
COL15A1P39059 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.71■■□□□ 1.39
COL15A1P39059 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
COL15A1P39059 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL15A1P39059 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.7■■□□□ 1.39
COL15A1P39059 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL15A1P39059 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL15A1P39059 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
COL15A1P39059 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
COL15A1P39059 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.7■■□□□ 1.39
COL15A1P39059 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL15A1P39059 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL15A1P39059 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
COL15A1P39059 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.7■■□□□ 1.38
COL15A1P39059 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
COL15A1P39059 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC23.7■■□□□ 1.38
COL15A1P39059 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
COL15A1P39059 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
COL15A1P39059 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.7■■□□□ 1.38
COL15A1P39059 AC106795.1-205ENST00000512851 1056 ntBASIC23.7■■□□□ 1.38
COL15A1P39059 AP002469.2-201ENST00000531724 424 ntBASIC23.7■■□□□ 1.38
COL15A1P39059 AC090616.6-201ENST00000582640 721 ntBASIC23.7■■□□□ 1.38
COL15A1P39059 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.7■■□□□ 1.38
COL15A1P39059 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.7■■□□□ 1.38
COL15A1P39059 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL15A1P39059 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.7■■□□□ 1.38
COL15A1P39059 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
COL15A1P39059 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
COL15A1P39059 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
COL15A1P39059 AC233702.3-201ENST00000578656 1387 ntBASIC23.7■■□□□ 1.38
COL15A1P39059 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.7■■□□□ 1.38
COL15A1P39059 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.7■■□□□ 1.38
COL15A1P39059 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
COL15A1P39059 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL15A1P39059 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL15A1P39059 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
COL15A1P39059 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
COL15A1P39059 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.69■■□□□ 1.38
COL15A1P39059 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC23.69■■□□□ 1.38
COL15A1P39059 TK1-205ENST00000590862 642 ntTSL 3 BASIC23.69■■□□□ 1.38
COL15A1P39059 GPR32P1-201ENST00000601788 811 ntBASIC23.69■■□□□ 1.38
COL15A1P39059 AC023511.2-201ENST00000618803 211 ntBASIC23.69■■□□□ 1.38
COL15A1P39059 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL15A1P39059 AC093484.2-201ENST00000580996 2166 ntBASIC23.69■■□□□ 1.38
COL15A1P39059 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.69■■□□□ 1.38
COL15A1P39059 FEM1AP3-201ENST00000403722 1741 ntBASIC23.69■■□□□ 1.38
COL15A1P39059 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
COL15A1P39059 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
COL15A1P39059 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.69■■□□□ 1.38
COL15A1P39059 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.68■■□□□ 1.38
COL15A1P39059 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.68■■□□□ 1.38
COL15A1P39059 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
COL15A1P39059 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL15A1P39059 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
COL15A1P39059 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
COL15A1P39059 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.67■■□□□ 1.38
COL15A1P39059 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.67■■□□□ 1.38
COL15A1P39059 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.67■■□□□ 1.38
COL15A1P39059 IRX1P1-201ENST00000438849 1838 ntBASIC23.67■■□□□ 1.38
COL15A1P39059 UBQLN4P1-201ENST00000461599 1801 ntBASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms