Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC010327.4-202ENST00000591484 748 ntBASIC22.93■■□□□ 1.26
KCNA3P22001 AL356488.2-201ENST00000602755 427 ntBASIC22.93■■□□□ 1.26
KCNA3P22001 AC027601.4-201ENST00000611259 610 ntBASIC22.93■■□□□ 1.26
KCNA3P22001 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
KCNA3P22001 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.93■■□□□ 1.26
KCNA3P22001 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
KCNA3P22001 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
KCNA3P22001 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
KCNA3P22001 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.92■■□□□ 1.26
KCNA3P22001 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.92■■□□□ 1.26
KCNA3P22001 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.92■■□□□ 1.26
KCNA3P22001 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 AC034105.1-201ENST00000563488 319 ntBASIC22.92■■□□□ 1.26
KCNA3P22001 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.92■■□□□ 1.26
KCNA3P22001 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 FAM197Y3-203ENST00000618346 717 ntBASIC22.92■■□□□ 1.26
KCNA3P22001 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
KCNA3P22001 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.92■■□□□ 1.26
KCNA3P22001 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.92■■□□□ 1.26
KCNA3P22001 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
KCNA3P22001 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
KCNA3P22001 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
KCNA3P22001 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC22.91■■□□□ 1.26
KCNA3P22001 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.91■■□□□ 1.26
KCNA3P22001 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.91■■□□□ 1.26
KCNA3P22001 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC22.91■■□□□ 1.26
KCNA3P22001 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.91■■□□□ 1.26
KCNA3P22001 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
KCNA3P22001 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
KCNA3P22001 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
KCNA3P22001 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.9■■□□□ 1.26
KCNA3P22001 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.9■■□□□ 1.26
KCNA3P22001 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
KCNA3P22001 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.9■■□□□ 1.26
KCNA3P22001 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.9■■□□□ 1.26
KCNA3P22001 MTDHP3-201ENST00000594186 672 ntBASIC22.9■■□□□ 1.26
KCNA3P22001 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC22.9■■□□□ 1.26
KCNA3P22001 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.9■■□□□ 1.26
KCNA3P22001 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC22.9■■□□□ 1.26
KCNA3P22001 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
KCNA3P22001 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
KCNA3P22001 AC034236.2-201ENST00000606662 1610 ntBASIC22.9■■□□□ 1.26
KCNA3P22001 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.89■■□□□ 1.26
KCNA3P22001 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
KCNA3P22001 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.89■■□□□ 1.26
KCNA3P22001 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
KCNA3P22001 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
KCNA3P22001 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.89■■□□□ 1.26
KCNA3P22001 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22.89■■□□□ 1.25
KCNA3P22001 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.89■■□□□ 1.25
KCNA3P22001 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.89■■□□□ 1.25
KCNA3P22001 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.89■■□□□ 1.25
KCNA3P22001 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.89■■□□□ 1.25
KCNA3P22001 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.89■■□□□ 1.25
KCNA3P22001 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.89■■□□□ 1.25
KCNA3P22001 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
KCNA3P22001 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.89■■□□□ 1.25
KCNA3P22001 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
KCNA3P22001 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.88■■□□□ 1.25
KCNA3P22001 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 KRT8P32-201ENST00000512863 1461 ntBASIC22.88■■□□□ 1.25
KCNA3P22001 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.88■■□□□ 1.25
KCNA3P22001 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
KCNA3P22001 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.88■■□□□ 1.25
KCNA3P22001 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
KCNA3P22001 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
KCNA3P22001 AP001269.4-201ENST00000609611 512 ntBASIC22.88■■□□□ 1.25
KCNA3P22001 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms