Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SMPD1P17405 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD1P17405 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD1P17405 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD1P17405 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMPD1P17405 IGHGP-201ENST00000390555 1178 ntBASIC20.83■□□□□ 0.93
SMPD1P17405 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
SMPD1P17405 AC079781.3-201ENST00000449110 356 ntBASIC20.83■□□□□ 0.93
SMPD1P17405 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.83■□□□□ 0.93
SMPD1P17405 AC074051.2-201ENST00000565115 352 ntBASIC20.83■□□□□ 0.93
SMPD1P17405 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.83■□□□□ 0.93
SMPD1P17405 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.83■□□□□ 0.93
SMPD1P17405 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.83■□□□□ 0.93
SMPD1P17405 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMPD1P17405 AC233702.3-201ENST00000578656 1387 ntBASIC20.83■□□□□ 0.92
SMPD1P17405 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.83■□□□□ 0.92
SMPD1P17405 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SMPD1P17405 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMPD1P17405 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.82■□□□□ 0.92
SMPD1P17405 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.82■□□□□ 0.92
SMPD1P17405 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SMPD1P17405 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.82■□□□□ 0.92
SMPD1P17405 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.82■□□□□ 0.92
SMPD1P17405 AC104819.1-201ENST00000504587 486 ntBASIC20.82■□□□□ 0.92
SMPD1P17405 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.82■□□□□ 0.92
SMPD1P17405 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SMPD1P17405 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMPD1P17405 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.82■□□□□ 0.92
SMPD1P17405 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.81■□□□□ 0.92
SMPD1P17405 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 LINC00167-201ENST00000530583 1419 ntBASIC20.81■□□□□ 0.92
SMPD1P17405 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.81■□□□□ 0.92
SMPD1P17405 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.81■□□□□ 0.92
SMPD1P17405 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 AC024563.2-201ENST00000603282 481 ntBASIC20.81■□□□□ 0.92
SMPD1P17405 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.81■□□□□ 0.92
SMPD1P17405 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.81■□□□□ 0.92
SMPD1P17405 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMPD1P17405 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.8■□□□□ 0.92
SMPD1P17405 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SMPD1P17405 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.8■□□□□ 0.92
SMPD1P17405 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.8■□□□□ 0.92
SMPD1P17405 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SMPD1P17405 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.8■□□□□ 0.92
SMPD1P17405 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.8■□□□□ 0.92
SMPD1P17405 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SMPD1P17405 AC138894.3-201ENST00000603787 634 ntBASIC20.8■□□□□ 0.92
SMPD1P17405 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMPD1P17405 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SMPD1P17405 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD1P17405 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD1P17405 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD1P17405 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.79■□□□□ 0.92
SMPD1P17405 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.79■□□□□ 0.92
SMPD1P17405 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMPD1P17405 AL160237.2-201ENST00000556165 472 ntBASIC20.79■□□□□ 0.92
SMPD1P17405 AL592071.1-201ENST00000611956 408 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms