Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CfdP03953 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CfdP03953 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CfdP03953 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CfdP03953 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.27□□□□□ -0.29
CfdP03953 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CfdP03953 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.27□□□□□ -0.29
CfdP03953 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CfdP03953 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CfdP03953 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CfdP03953 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
CfdP03953 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.27□□□□□ -0.29
CfdP03953 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CfdP03953 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CfdP03953 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CfdP03953 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CfdP03953 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.26□□□□□ -0.29
CfdP03953 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CfdP03953 Gm15378-201ENSMUST00000121894 207 ntBASIC13.26□□□□□ -0.29
CfdP03953 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CfdP03953 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CfdP03953 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CfdP03953 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.26□□□□□ -0.29
CfdP03953 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.26□□□□□ -0.29
CfdP03953 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.26□□□□□ -0.29
CfdP03953 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.26□□□□□ -0.29
CfdP03953 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.26□□□□□ -0.29
CfdP03953 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CfdP03953 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.26□□□□□ -0.29
CfdP03953 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CfdP03953 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CfdP03953 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.25□□□□□ -0.29
CfdP03953 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CfdP03953 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.25□□□□□ -0.29
CfdP03953 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Gm5643-201ENSMUST00000117081 966 ntBASIC13.25□□□□□ -0.29
CfdP03953 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.25□□□□□ -0.29
CfdP03953 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Gm8495-201ENSMUST00000188740 694 ntBASIC13.25□□□□□ -0.29
CfdP03953 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.25□□□□□ -0.29
CfdP03953 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CfdP03953 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms