Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 POLD2P1-201ENST00000511220 997 ntBASIC17.57■□□□□ 0.4
RRP8O43159 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.57■□□□□ 0.4
RRP8O43159 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.57■□□□□ 0.4
RRP8O43159 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.57■□□□□ 0.4
RRP8O43159 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 AC073314.1-201ENST00000568729 2216 ntBASIC17.57■□□□□ 0.4
RRP8O43159 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
RRP8O43159 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RRP8O43159 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.56■□□□□ 0.4
RRP8O43159 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.56■□□□□ 0.4
RRP8O43159 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.56■□□□□ 0.4
RRP8O43159 NUS1P2-201ENST00000417358 873 ntBASIC17.56■□□□□ 0.4
RRP8O43159 AL031284.1-201ENST00000419297 478 ntBASIC17.56■□□□□ 0.4
RRP8O43159 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 SLC25A1P1-201ENST00000528351 927 ntBASIC17.56■□□□□ 0.4
RRP8O43159 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 AC106730.1-201ENST00000566722 1090 ntBASIC17.56■□□□□ 0.4
RRP8O43159 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.56■□□□□ 0.4
RRP8O43159 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RRP8O43159 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RRP8O43159 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
RRP8O43159 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RRP8O43159 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.55■□□□□ 0.4
RRP8O43159 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 MIR940-201ENST00000401276 94 ntBASIC17.55■□□□□ 0.4
RRP8O43159 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
RRP8O43159 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.55■□□□□ 0.4
RRP8O43159 IGHV3-47-201ENST00000425060 335 ntBASIC17.55■□□□□ 0.4
RRP8O43159 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.55■□□□□ 0.4
RRP8O43159 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.55■□□□□ 0.4
RRP8O43159 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 AF238378.1-201ENST00000526806 358 ntBASIC17.55■□□□□ 0.4
RRP8O43159 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.55■□□□□ 0.4
RRP8O43159 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
RRP8O43159 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.55■□□□□ 0.4
RRP8O43159 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.55■□□□□ 0.4
RRP8O43159 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.55■□□□□ 0.4
RRP8O43159 AL390719.2-201ENST00000606993 987 ntBASIC17.55■□□□□ 0.4
RRP8O43159 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RRP8O43159 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RRP8O43159 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.55■□□□□ 0.4
RRP8O43159 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.55■□□□□ 0.4
RRP8O43159 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RRP8O43159 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RRP8O43159 ZNF259P1-201ENST00000407656 1365 ntBASIC17.54■□□□□ 0.4
RRP8O43159 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.54■□□□□ 0.4
RRP8O43159 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.54■□□□□ 0.4
RRP8O43159 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RRP8O43159 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RRP8O43159 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms