Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.35■□□□□ 0.85
TNRC18O15417 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNRC18O15417 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.35■□□□□ 0.85
TNRC18O15417 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TNRC18O15417 PMS2P4-201ENST00000412466 1052 ntBASIC20.34■□□□□ 0.85
TNRC18O15417 AL132655.2-201ENST00000596276 594 ntBASIC20.34■□□□□ 0.85
TNRC18O15417 MTDHP4-201ENST00000600287 670 ntBASIC20.34■□□□□ 0.85
TNRC18O15417 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.34■□□□□ 0.85
TNRC18O15417 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TNRC18O15417 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNRC18O15417 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.34■□□□□ 0.85
TNRC18O15417 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNRC18O15417 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.34■□□□□ 0.85
TNRC18O15417 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.34■□□□□ 0.85
TNRC18O15417 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.34■□□□□ 0.85
TNRC18O15417 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNRC18O15417 HOXB1-202ENST00000577092 1414 ntBASIC20.34■□□□□ 0.85
TNRC18O15417 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TNRC18O15417 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TNRC18O15417 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.34■□□□□ 0.85
TNRC18O15417 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNRC18O15417 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.33■□□□□ 0.85
TNRC18O15417 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TNRC18O15417 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNRC18O15417 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.33■□□□□ 0.85
TNRC18O15417 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
TNRC18O15417 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TNRC18O15417 AL356309.3-201ENST00000624132 1934 ntBASIC20.33■□□□□ 0.85
TNRC18O15417 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.33■□□□□ 0.84
TNRC18O15417 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.33■□□□□ 0.84
TNRC18O15417 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.33■□□□□ 0.84
TNRC18O15417 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.33■□□□□ 0.84
TNRC18O15417 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.33■□□□□ 0.84
TNRC18O15417 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TNRC18O15417 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.32■□□□□ 0.84
TNRC18O15417 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.32■□□□□ 0.84
TNRC18O15417 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.32■□□□□ 0.84
TNRC18O15417 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TNRC18O15417 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.32■□□□□ 0.84
TNRC18O15417 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.32■□□□□ 0.84
TNRC18O15417 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TNRC18O15417 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNRC18O15417 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.32■□□□□ 0.84
TNRC18O15417 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.32■□□□□ 0.84
TNRC18O15417 INTS4P1-201ENST00000438455 1935 ntBASIC20.32■□□□□ 0.84
TNRC18O15417 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
TNRC18O15417 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.31■□□□□ 0.84
TNRC18O15417 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.31■□□□□ 0.84
TNRC18O15417 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TNRC18O15417 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
TNRC18O15417 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 ARSEP1-201ENST00000420443 635 ntBASIC20.31■□□□□ 0.84
TNRC18O15417 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 AC116407.2-201ENST00000613639 860 ntBASIC20.31■□□□□ 0.84
TNRC18O15417 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.31■□□□□ 0.84
TNRC18O15417 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TNRC18O15417 AL024507.2-201ENST00000606070 2574 ntBASIC20.31■□□□□ 0.84
TNRC18O15417 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.31■□□□□ 0.84
TNRC18O15417 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TNRC18O15417 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNRC18O15417 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.31■□□□□ 0.84
TNRC18O15417 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.3■□□□□ 0.84
TNRC18O15417 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.3■□□□□ 0.84
TNRC18O15417 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.3■□□□□ 0.84
TNRC18O15417 AC024563.2-201ENST00000603282 481 ntBASIC20.3■□□□□ 0.84
TNRC18O15417 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.3■□□□□ 0.84
TNRC18O15417 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.3■□□□□ 0.84
TNRC18O15417 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.3■□□□□ 0.84
TNRC18O15417 AC008761.3-201ENST00000624803 892 ntBASIC20.3■□□□□ 0.84
TNRC18O15417 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.3■□□□□ 0.84
TNRC18O15417 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.3■□□□□ 0.84
TNRC18O15417 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNRC18O15417 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.29■□□□□ 0.84
TNRC18O15417 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.29■□□□□ 0.84
TNRC18O15417 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNRC18O15417 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TNRC18O15417 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.29■□□□□ 0.84
TNRC18O15417 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.29■□□□□ 0.84
TNRC18O15417 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.29■□□□□ 0.84
TNRC18O15417 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms