Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CSNK1G3Q9Y6M4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 MIR3917-201ENST00000580971 93 ntBASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 NPAP1P7-201ENST00000613027 823 ntBASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1G3Q9Y6M4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 HLA-F-220ENST00000434407 884 ntBASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 AC011498.5-201ENST00000592027 486 ntBASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 AL121672.3-201ENST00000608644 468 ntBASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1G3Q9Y6M4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 AC087289.5-201ENST00000586076 3175 ntBASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 TEX21P-204ENST00000641479 1693 ntBASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 AL512353.2-201ENST00000448759 1962 ntBASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1G3Q9Y6M4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms