Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NINLQ9Y2I6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 AC246785.2-201ENST00000432512 513 ntBASIC25.62■■□□□ 1.69
NINLQ9Y2I6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 AL162741.1-201ENST00000565563 1558 ntBASIC25.62■■□□□ 1.69
NINLQ9Y2I6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.62■■□□□ 1.69
NINLQ9Y2I6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 AC009065.1-201ENST00000564055 1225 ntBASIC25.61■■□□□ 1.69
NINLQ9Y2I6 NPAP1P7-201ENST00000613027 823 ntBASIC25.61■■□□□ 1.69
NINLQ9Y2I6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 AL161938.1-201ENST00000569833 2180 ntBASIC25.61■■□□□ 1.69
NINLQ9Y2I6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NINLQ9Y2I6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC25.6■■□□□ 1.69
NINLQ9Y2I6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 NFYC-AS1-201ENST00000606277 1687 ntBASIC25.59■■□□□ 1.69
NINLQ9Y2I6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 AC005332.7-201ENST00000614046 2005 ntBASIC25.59■■□□□ 1.69
NINLQ9Y2I6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NINLQ9Y2I6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 KRT8P50-201ENST00000562022 1438 ntBASIC25.58■■□□□ 1.69
NINLQ9Y2I6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC25.58■■□□□ 1.69
NINLQ9Y2I6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
NINLQ9Y2I6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 AC011498.5-201ENST00000592027 486 ntBASIC25.57■■□□□ 1.68
NINLQ9Y2I6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.57■■□□□ 1.68
NINLQ9Y2I6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms