Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 IGHV3-47-201ENST00000425060 335 ntBASIC18.57■□□□□ 0.56
NCDNQ9UBB6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 RPL13AP23-201ENST00000480739 586 ntBASIC18.57■□□□□ 0.56
NCDNQ9UBB6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NCDNQ9UBB6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 NSUN5P1-202ENST00000421140 1535 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 NSUN5P2-203ENST00000457352 1529 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 AL023284.2-201ENST00000405850 579 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 AC027796.2-201ENST00000575326 344 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 AC140113.2-201ENST00000604370 208 ntBASIC18.56■□□□□ 0.56
NCDNQ9UBB6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCDNQ9UBB6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 AP005212.1-201ENST00000581547 1997 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 MINOS1P3-201ENST00000457048 203 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 AL390719.2-201ENST00000606993 987 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 AC007225.1-201ENST00000566331 1836 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NCDNQ9UBB6 AC243591.1-201ENST00000452967 1364 ntBASIC18.55■□□□□ 0.56
NCDNQ9UBB6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NCDNQ9UBB6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms