Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 SLC25A3P1-201ENST00000443844 931 ntBASIC19.97■□□□□ 0.79
CISHQ9NSE2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 WWOX-216ENST00000569818 525 ntBASIC19.97■□□□□ 0.79
CISHQ9NSE2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.97■□□□□ 0.79
CISHQ9NSE2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CISHQ9NSE2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 LINC01023-201ENST00000606054 436 ntBASIC19.96■□□□□ 0.79
CISHQ9NSE2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CISHQ9NSE2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CISHQ9NSE2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 AL499627.1-201ENST00000569373 2188 ntBASIC19.95■□□□□ 0.78
CISHQ9NSE2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 AL138781.2-201ENST00000617896 1843 ntBASIC19.95■□□□□ 0.78
CISHQ9NSE2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CISHQ9NSE2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.95■□□□□ 0.78
CISHQ9NSE2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CISHQ9NSE2 ECEL1P3-201ENST00000427961 737 ntBASIC19.94■□□□□ 0.78
CISHQ9NSE2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CISHQ9NSE2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms