Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.13■■□□□ 1.13
DDX4Q9NQI0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 AC026396.1-201ENST00000419388 421 ntBASIC22.12■■□□□ 1.13
DDX4Q9NQI0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 TPM4P1-201ENST00000436100 807 ntBASIC22.12■■□□□ 1.13
DDX4Q9NQI0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DDX4Q9NQI0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 Z83836.1-201ENST00000624605 1642 ntBASIC22.11■■□□□ 1.13
DDX4Q9NQI0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 PVRIG2P-201ENST00000435460 978 ntBASIC22.11■■□□□ 1.13
DDX4Q9NQI0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
DDX4Q9NQI0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PKD1P6-201ENST00000343738 4769 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 UNC93B7-201ENST00000509439 705 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 TPSP2-201ENST00000561760 610 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PRELID1P1-202ENST00000567272 903 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 Z98044.1-201ENST00000632503 1764 ntBASIC22.1■■□□□ 1.13
DDX4Q9NQI0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
DDX4Q9NQI0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 KRT18P1-202ENST00000452408 1331 ntBASIC22.09■■□□□ 1.13
DDX4Q9NQI0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 AL357033.4-201ENST00000617703 1807 ntBASIC22.09■■□□□ 1.13
DDX4Q9NQI0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 AC005332.3-201ENST00000589904 676 ntBASIC22.09■■□□□ 1.13
DDX4Q9NQI0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 MTMR9LP-203ENST00000426597 1545 ntBASIC22.09■■□□□ 1.13
DDX4Q9NQI0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
DDX4Q9NQI0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.08■■□□□ 1.13
DDX4Q9NQI0 HEIH-201ENST00000623091 1652 ntBASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms