Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 RARRES2P10-201ENST00000564312 460 ntBASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXP3Q9BZS1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 MIR1224-201ENST00000408193 85 ntBASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXP3Q9BZS1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 AL355075.4-201ENST00000554988 638 ntBASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 AC133561.5-201ENST00000635547 218 ntBASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.34■□□□□ 0.69
FOXP3Q9BZS1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FOXP3Q9BZS1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms