Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNPS1P1-201ENST00000507437 918 ntBASIC19.49■□□□□ 0.71
CDCA3Q99618 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.49■□□□□ 0.71
CDCA3Q99618 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA3Q99618 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.49■□□□□ 0.71
CDCA3Q99618 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA3Q99618 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
CDCA3Q99618 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDCA3Q99618 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.49■□□□□ 0.71
CDCA3Q99618 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 FEM1AP3-201ENST00000403722 1741 ntBASIC19.48■□□□□ 0.71
CDCA3Q99618 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA3Q99618 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CDCA3Q99618 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA3Q99618 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA3Q99618 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.48■□□□□ 0.71
CDCA3Q99618 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDCA3Q99618 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.48■□□□□ 0.71
CDCA3Q99618 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.48■□□□□ 0.71
CDCA3Q99618 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDCA3Q99618 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.48■□□□□ 0.71
CDCA3Q99618 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA3Q99618 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.47■□□□□ 0.71
CDCA3Q99618 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.47■□□□□ 0.71
CDCA3Q99618 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDCA3Q99618 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA3Q99618 AC091607.1-201ENST00000490318 1060 ntBASIC19.47■□□□□ 0.71
CDCA3Q99618 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.47■□□□□ 0.71
CDCA3Q99618 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.47■□□□□ 0.71
CDCA3Q99618 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDCA3Q99618 MIR5100-201ENST00000579544 119 ntBASIC19.47■□□□□ 0.71
CDCA3Q99618 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDCA3Q99618 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.47■□□□□ 0.71
CDCA3Q99618 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDCA3Q99618 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDCA3Q99618 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDCA3Q99618 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA3Q99618 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
CDCA3Q99618 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA3Q99618 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.46■□□□□ 0.71
CDCA3Q99618 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA3Q99618 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.46■□□□□ 0.71
CDCA3Q99618 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA3Q99618 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.46■□□□□ 0.71
CDCA3Q99618 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.46■□□□□ 0.71
CDCA3Q99618 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CDCA3Q99618 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDCA3Q99618 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms