Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 AC099336.1-202ENST00000602961 463 ntBASIC15.88■□□□□ 0.13
SPG11Q96JI7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 KRT8P3-201ENST00000519669 1449 ntBASIC15.88■□□□□ 0.13
SPG11Q96JI7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 BNIP3P18-201ENST00000593976 575 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 AL162377.1-201ENST00000618844 1793 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 MIR940-201ENST00000401276 94 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 KRT18P23-201ENST00000435622 1283 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 AC018712.1-201ENST00000455767 687 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 AC055717.3-201ENST00000622967 595 ntBASIC15.87■□□□□ 0.13
SPG11Q96JI7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.87■□□□□ 0.13
SPG11Q96JI7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPG11Q96JI7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 IGHGP-201ENST00000390555 1178 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 RPL13AP23-201ENST00000480739 586 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 AL592071.1-201ENST00000611956 408 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 AC012676.1-201ENST00000574705 1949 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 AC139887.3-201ENST00000568585 713 ntBASIC15.86■□□□□ 0.13
SPG11Q96JI7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.86■□□□□ 0.13
SPG11Q96JI7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPG11Q96JI7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 VENTXP7-201ENST00000475503 772 ntBASIC15.85■□□□□ 0.13
SPG11Q96JI7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.85■□□□□ 0.13
SPG11Q96JI7 AP001160.2-201ENST00000596071 487 ntBASIC15.85■□□□□ 0.13
SPG11Q96JI7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SPG11Q96JI7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms