Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 AP000550.4-202ENST00000639755 178 ntBASIC17.68■□□□□ 0.42
TM9SF4Q92544 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TM9SF4Q92544 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.68■□□□□ 0.42
TM9SF4Q92544 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 AL031133.1-201ENST00000406807 723 ntBASIC17.67■□□□□ 0.42
TM9SF4Q92544 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 PRSS44-201ENST00000515154 1146 ntBASIC17.67■□□□□ 0.42
TM9SF4Q92544 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 AL121956.5-201ENST00000625261 221 ntBASIC17.67■□□□□ 0.42
TM9SF4Q92544 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 AC120498.9-201ENST00000339021 3867 ntBASIC17.67■□□□□ 0.42
TM9SF4Q92544 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TM9SF4Q92544 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TM9SF4Q92544 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 LINC01465-201ENST00000408887 1940 ntBASIC17.66■□□□□ 0.42
TM9SF4Q92544 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 AL138781.2-201ENST00000617896 1843 ntBASIC17.66■□□□□ 0.42
TM9SF4Q92544 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 AC011558.1-201ENST00000623459 338 ntBASIC17.66■□□□□ 0.42
TM9SF4Q92544 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.66■□□□□ 0.42
TM9SF4Q92544 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TM9SF4Q92544 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms