Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 RASA4DP-201ENST00000460726 1199 ntBASIC19.85■□□□□ 0.77
RNF135Q8IUD6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.85■□□□□ 0.77
RNF135Q8IUD6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 KRT18P1-202ENST00000452408 1331 ntBASIC19.84■□□□□ 0.77
RNF135Q8IUD6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 AC106795.1-205ENST00000512851 1056 ntBASIC19.84■□□□□ 0.77
RNF135Q8IUD6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 AC091304.2-201ENST00000564639 760 ntBASIC19.84■□□□□ 0.77
RNF135Q8IUD6 SLC25A6P4-201ENST00000586535 553 ntBASIC19.84■□□□□ 0.77
RNF135Q8IUD6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
RNF135Q8IUD6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF135Q8IUD6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF135Q8IUD6 LINC01711-201ENST00000598340 967 ntBASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AL671883.3-201ENST00000603274 991 ntBASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AL121772.3-201ENST00000610840 674 ntBASIC19.83■□□□□ 0.77
RNF135Q8IUD6 AC117500.6-201ENST00000624871 588 ntBASIC19.83■□□□□ 0.77
RNF135Q8IUD6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF135Q8IUD6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF135Q8IUD6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF135Q8IUD6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF135Q8IUD6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF135Q8IUD6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 AP002469.2-201ENST00000531724 424 ntBASIC19.82■□□□□ 0.76
RNF135Q8IUD6 AL662844.1-201ENST00000546340 181 ntBASIC19.82■□□□□ 0.76
RNF135Q8IUD6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF135Q8IUD6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF135Q8IUD6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF135Q8IUD6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF135Q8IUD6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF135Q8IUD6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF135Q8IUD6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms