Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 FAM220CP-201ENST00000395253 831 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC005104.2-201ENST00000427818 678 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 KRT18P23-201ENST00000435622 1283 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC007952.6-201ENST00000573168 2673 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC003957.1-201ENST00000625108 2673 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC064862.7-201ENST00000604520 867 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AC008556.1-201ENST00000610908 2040 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 AL158211.5-201ENST00000623583 2518 ntBASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13BQ7Z7G8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 MCCD1P1-208ENST00000445732 328 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AL512353.2-201ENST00000448759 1962 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 Z82202.1-201ENST00000623446 1880 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 GAS2L1P1-201ENST00000420145 1480 ntBASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC11.55□□□□□ -0.56
VPS13BQ7Z7G8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms