Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HSPG2P98160 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.6□□□□□ -0.55
HSPG2P98160 MCCD1P2-201ENST00000423228 335 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 AC092910.1-201ENST00000482027 1129 ntBASIC11.6□□□□□ -0.55
HSPG2P98160 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.6□□□□□ -0.55
HSPG2P98160 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HSPG2P98160 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.6□□□□□ -0.55
HSPG2P98160 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.6□□□□□ -0.55
HSPG2P98160 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.6□□□□□ -0.55
HSPG2P98160 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.59□□□□□ -0.55
HSPG2P98160 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.59□□□□□ -0.55
HSPG2P98160 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.59□□□□□ -0.55
HSPG2P98160 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
HSPG2P98160 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC11.59□□□□□ -0.55
HSPG2P98160 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 AL139400.1-201ENST00000366220 510 ntBASIC11.59□□□□□ -0.55
HSPG2P98160 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.59□□□□□ -0.55
HSPG2P98160 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
HSPG2P98160 AP005117.1-201ENST00000584346 1413 ntBASIC11.59□□□□□ -0.55
HSPG2P98160 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
HSPG2P98160 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
HSPG2P98160 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
HSPG2P98160 AP003733.1-201ENST00000491725 852 ntBASIC11.58□□□□□ -0.55
HSPG2P98160 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.58□□□□□ -0.55
HSPG2P98160 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.58□□□□□ -0.55
HSPG2P98160 AC021087.4-201ENST00000563761 564 ntBASIC11.58□□□□□ -0.55
HSPG2P98160 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.58□□□□□ -0.55
HSPG2P98160 AL031432.2-201ENST00000566714 459 ntBASIC11.58□□□□□ -0.55
HSPG2P98160 AL928711.1-201ENST00000570165 459 ntBASIC11.58□□□□□ -0.55
HSPG2P98160 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.58□□□□□ -0.55
HSPG2P98160 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 AC133561.1-201ENST00000568600 2415 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 AL691432.2-201ENST00000607222 2038 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
HSPG2P98160 RBM17P3-201ENST00000417687 1192 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC11.58□□□□□ -0.56
HSPG2P98160 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.58□□□□□ -0.56
HSPG2P98160 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC11.58□□□□□ -0.56
HSPG2P98160 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 HOXB1-202ENST00000577092 1414 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
HSPG2P98160 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
HSPG2P98160 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 KRT18P27-201ENST00000427733 1299 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 AC138761.1-201ENST00000584393 385 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
HSPG2P98160 TP73-AS1-210ENST00000637775 1455 ntBASIC11.58□□□□□ -0.56
HSPG2P98160 KRT8P7-201ENST00000533003 1432 ntBASIC11.57□□□□□ -0.56
HSPG2P98160 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.57□□□□□ -0.56
HSPG2P98160 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
HSPG2P98160 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms