Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.09■■□□□ 1.29
PDE6BP35913 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.09■■□□□ 1.29
PDE6BP35913 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PDE6BP35913 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDE6BP35913 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.08■■□□□ 1.29
PDE6BP35913 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE6BP35913 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE6BP35913 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.08■■□□□ 1.29
PDE6BP35913 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.08■■□□□ 1.29
PDE6BP35913 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.08■■□□□ 1.29
PDE6BP35913 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.08■■□□□ 1.29
PDE6BP35913 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.08■■□□□ 1.29
PDE6BP35913 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.08■■□□□ 1.29
PDE6BP35913 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.08■■□□□ 1.29
PDE6BP35913 KRT89P-201ENST00000620027 1478 ntBASIC23.08■■□□□ 1.29
PDE6BP35913 TEX21P-204ENST00000641479 1693 ntBASIC23.08■■□□□ 1.29
PDE6BP35913 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDE6BP35913 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDE6BP35913 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.07■■□□□ 1.28
PDE6BP35913 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PDE6BP35913 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.07■■□□□ 1.28
PDE6BP35913 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PDE6BP35913 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.07■■□□□ 1.28
PDE6BP35913 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDE6BP35913 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
PDE6BP35913 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.07■■□□□ 1.28
PDE6BP35913 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
PDE6BP35913 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.06■■□□□ 1.28
PDE6BP35913 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.06■■□□□ 1.28
PDE6BP35913 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE6BP35913 AL031284.1-201ENST00000419297 478 ntBASIC23.06■■□□□ 1.28
PDE6BP35913 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.06■■□□□ 1.28
PDE6BP35913 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC23.06■■□□□ 1.28
PDE6BP35913 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.06■■□□□ 1.28
PDE6BP35913 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PDE6BP35913 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.06■■□□□ 1.28
PDE6BP35913 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDE6BP35913 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.06■■□□□ 1.28
PDE6BP35913 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PDE6BP35913 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PDE6BP35913 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE6BP35913 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE6BP35913 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 KRT18P67-201ENST00000432816 1264 ntBASIC23.05■■□□□ 1.28
PDE6BP35913 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.05■■□□□ 1.28
PDE6BP35913 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.05■■□□□ 1.28
PDE6BP35913 KRT18P58-201ENST00000527480 1120 ntBASIC23.05■■□□□ 1.28
PDE6BP35913 SLC25A1P1-201ENST00000528351 927 ntBASIC23.05■■□□□ 1.28
PDE6BP35913 AC009065.1-201ENST00000564055 1225 ntBASIC23.05■■□□□ 1.28
PDE6BP35913 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.05■■□□□ 1.28
PDE6BP35913 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PDE6BP35913 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDE6BP35913 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE6BP35913 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.04■■□□□ 1.28
PDE6BP35913 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.04■■□□□ 1.28
PDE6BP35913 AC092667.1-201ENST00000434301 2586 ntBASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms