Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFC4P35249 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFC4P35249 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RFC4P35249 AC006333.2-201ENST00000607957 2099 ntBASIC23.55■■□□□ 1.36
RFC4P35249 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.55■■□□□ 1.36
RFC4P35249 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RFC4P35249 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFC4P35249 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RFC4P35249 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.55■■□□□ 1.36
RFC4P35249 FAM197Y8-203ENST00000450145 560 ntBASIC23.55■■□□□ 1.36
RFC4P35249 AC091607.1-201ENST00000490318 1060 ntBASIC23.55■■□□□ 1.36
RFC4P35249 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.55■■□□□ 1.36
RFC4P35249 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.55■■□□□ 1.36
RFC4P35249 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.55■■□□□ 1.36
RFC4P35249 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
RFC4P35249 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.55■■□□□ 1.36
RFC4P35249 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RFC4P35249 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.55■■□□□ 1.36
RFC4P35249 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RFC4P35249 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.54■■□□□ 1.36
RFC4P35249 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
RFC4P35249 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RFC4P35249 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.54■■□□□ 1.36
RFC4P35249 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.54■■□□□ 1.36
RFC4P35249 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
RFC4P35249 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.54■■□□□ 1.36
RFC4P35249 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.54■■□□□ 1.36
RFC4P35249 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.54■■□□□ 1.36
RFC4P35249 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RFC4P35249 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.54■■□□□ 1.36
RFC4P35249 AL353692.3-201ENST00000407031 1396 ntBASIC23.53■■□□□ 1.36
RFC4P35249 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.53■■□□□ 1.36
RFC4P35249 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RFC4P35249 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
RFC4P35249 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.53■■□□□ 1.36
RFC4P35249 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.53■■□□□ 1.36
RFC4P35249 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.53■■□□□ 1.36
RFC4P35249 SLC25A1P1-201ENST00000528351 927 ntBASIC23.53■■□□□ 1.36
RFC4P35249 AC011840.4-201ENST00000578471 627 ntBASIC23.53■■□□□ 1.36
RFC4P35249 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.53■■□□□ 1.36
RFC4P35249 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.53■■□□□ 1.36
RFC4P35249 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.53■■□□□ 1.36
RFC4P35249 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFC4P35249 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFC4P35249 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RFC4P35249 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
RFC4P35249 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RFC4P35249 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.52■■□□□ 1.36
RFC4P35249 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.52■■□□□ 1.36
RFC4P35249 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.52■■□□□ 1.36
RFC4P35249 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.52■■□□□ 1.36
RFC4P35249 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.52■■□□□ 1.36
RFC4P35249 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.52■■□□□ 1.36
RFC4P35249 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RFC4P35249 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.52■■□□□ 1.35
RFC4P35249 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 TEX21P-204ENST00000641479 1693 ntBASIC23.51■■□□□ 1.35
RFC4P35249 KRT8P32-201ENST00000512863 1461 ntBASIC23.51■■□□□ 1.35
RFC4P35249 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RFC4P35249 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.51■■□□□ 1.35
RFC4P35249 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RFC4P35249 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.51■■□□□ 1.35
RFC4P35249 POM121L3P-201ENST00000419331 1163 ntBASIC23.51■■□□□ 1.35
RFC4P35249 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.51■■□□□ 1.35
RFC4P35249 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RFC4P35249 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.5■■□□□ 1.35
RFC4P35249 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RFC4P35249 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFC4P35249 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RFC4P35249 AL031284.1-201ENST00000419297 478 ntBASIC23.5■■□□□ 1.35
RFC4P35249 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.5■■□□□ 1.35
RFC4P35249 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.5■■□□□ 1.35
RFC4P35249 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms