Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Gm7862-201ENSMUST00000121461 292 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Gm5364-201ENSMUST00000216789 889 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf9P20334 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm15372-201ENSMUST00000120729 834 ntBASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm27867-201ENSMUST00000184778 125 ntBASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf9P20334 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Tnfrsf9P20334 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Mir8112-201ENSMUST00000184382 131 ntBASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf9P20334 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.94□□□□□ -0.34
Tnfrsf9P20334 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms