Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KRT8P7-201ENST00000533003 1432 ntBASIC18.83■□□□□ 0.61
PDGFBP01127 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PDGFBP01127 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.83■□□□□ 0.61
PDGFBP01127 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDGFBP01127 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.83■□□□□ 0.6
PDGFBP01127 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.83■□□□□ 0.6
PDGFBP01127 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFBP01127 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.83■□□□□ 0.6
PDGFBP01127 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.83■□□□□ 0.6
PDGFBP01127 AC034105.1-201ENST00000563488 319 ntBASIC18.83■□□□□ 0.6
PDGFBP01127 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFBP01127 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.83■□□□□ 0.6
PDGFBP01127 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
PDGFBP01127 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDGFBP01127 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.83■□□□□ 0.6
PDGFBP01127 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PDGFBP01127 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDGFBP01127 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDGFBP01127 AL109659.2-201ENST00000606809 1674 ntBASIC18.82■□□□□ 0.6
PDGFBP01127 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.82■□□□□ 0.6
PDGFBP01127 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.82■□□□□ 0.6
PDGFBP01127 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFBP01127 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PDGFBP01127 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFBP01127 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.82■□□□□ 0.6
PDGFBP01127 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 MTDHP3-201ENST00000594186 672 ntBASIC18.82■□□□□ 0.6
PDGFBP01127 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.82■□□□□ 0.6
PDGFBP01127 AC083906.6-201ENST00000641366 219 ntBASIC18.82■□□□□ 0.6
PDGFBP01127 AC079781.4-201ENST00000641908 219 ntBASIC18.82■□□□□ 0.6
PDGFBP01127 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PDGFBP01127 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PDGFBP01127 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PDGFBP01127 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFBP01127 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFBP01127 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PDGFBP01127 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.81■□□□□ 0.6
PDGFBP01127 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.81■□□□□ 0.6
PDGFBP01127 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFBP01127 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.81■□□□□ 0.6
PDGFBP01127 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 MIR3687-2-201ENST00000577708 61 ntBASIC18.81■□□□□ 0.6
PDGFBP01127 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 MIR3687-1-201ENST00000614492 61 ntBASIC18.81■□□□□ 0.6
PDGFBP01127 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.81■□□□□ 0.6
PDGFBP01127 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.81■□□□□ 0.6
PDGFBP01127 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFBP01127 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDGFBP01127 AC026310.3-201ENST00000625186 2373 ntBASIC18.81■□□□□ 0.6
PDGFBP01127 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFBP01127 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PDGFBP01127 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PDGFBP01127 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PDGFBP01127 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.8■□□□□ 0.6
PDGFBP01127 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PDGFBP01127 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.8■□□□□ 0.6
PDGFBP01127 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PDGFBP01127 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PDGFBP01127 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDGFBP01127 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms