Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 Z98044.1-201ENST00000632503 1764 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 KRT8P26-201ENST00000534154 1276 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC009065.1-201ENST00000564055 1225 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC016734.2-201ENST00000624325 1377 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC007952.6-201ENST00000573168 2673 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC003957.1-201ENST00000625108 2673 ntBASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MBD3L4A6NDZ8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 DUSP5P1-201ENST00000441325 1139 ntBASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 CLEC4GP1-201ENST00000596555 870 ntBASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.46■□□□□ 0.23
MBD3L4A6NDZ8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
MBD3L4A6NDZ8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 AL357033.4-201ENST00000617703 1807 ntBASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
MBD3L4A6NDZ8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 AC073130.3-201ENST00000624389 2278 ntBASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.44■□□□□ 0.22
MBD3L4A6NDZ8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms