Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 FEM1AP3-201ENST00000403722 1741 ntBASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LOC102724428A0A0B4J2F2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 SLC25A1P1-201ENST00000528351 927 ntBASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.83■■□□□ 1.41
LOC102724428A0A0B4J2F2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
LOC102724428A0A0B4J2F2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LOC102724428A0A0B4J2F2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LOC102724428A0A0B4J2F2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 KRT89P-201ENST00000620027 1478 ntBASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 AL773604.1-201ENST00000617417 272 ntBASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 TREX1-205ENST00000625293 1783 ntBASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.82■■□□□ 1.4
LOC102724428A0A0B4J2F2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 MINOS1P3-201ENST00000457048 203 ntBASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
LOC102724428A0A0B4J2F2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 FAM197Y8-203ENST00000450145 560 ntBASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC011840.4-201ENST00000578471 627 ntBASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LOC102724428A0A0B4J2F2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms