Protein–RNA interactions for Protein: V9GXR0

H2-Bl, Histocompatibility 2, blastocyst, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-BlV9GXR0 Mir3960-201ENSMUST00000198213 73 ntBASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-BlV9GXR0 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
H2-BlV9GXR0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-BlV9GXR0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
H2-BlV9GXR0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Gm45364-201ENSMUST00000210883 159 ntBASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2-BlV9GXR0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2-BlV9GXR0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
H2-BlV9GXR0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Gm9812-201ENSMUST00000061934 968 ntBASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
H2-BlV9GXR0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.14■■□□□ 1.13
H2-BlV9GXR0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
H2-BlV9GXR0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms