Protein–RNA interactions for Protein: Q9R226

Khdrbs3, KH domain-containing, RNA-binding, signal transduction-associated protein 3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdrbs3Q9R226 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Khdrbs3Q9R226 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Khdrbs3Q9R226 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdrbs3Q9R226 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdrbs3Q9R226 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Khdrbs3Q9R226 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Khdrbs3Q9R226 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdrbs3Q9R226 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdrbs3Q9R226 Gm30023-201ENSMUST00000197970 889 ntBASIC20.94■□□□□ 0.94
Khdrbs3Q9R226 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdrbs3Q9R226 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdrbs3Q9R226 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Khdrbs3Q9R226 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Khdrbs3Q9R226 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Khdrbs3Q9R226 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Khdrbs3Q9R226 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Khdrbs3Q9R226 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Khdrbs3Q9R226 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Khdrbs3Q9R226 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
Khdrbs3Q9R226 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.91■□□□□ 0.94
Khdrbs3Q9R226 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Khdrbs3Q9R226 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Khdrbs3Q9R226 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Khdrbs3Q9R226 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Khdrbs3Q9R226 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Khdrbs3Q9R226 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Khdrbs3Q9R226 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
Khdrbs3Q9R226 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Khdrbs3Q9R226 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Khdrbs3Q9R226 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Khdrbs3Q9R226 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Khdrbs3Q9R226 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Khdrbs3Q9R226 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdrbs3Q9R226 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdrbs3Q9R226 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Khdrbs3Q9R226 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdrbs3Q9R226 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Khdrbs3Q9R226 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Khdrbs3Q9R226 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Khdrbs3Q9R226 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.83■□□□□ 0.92
Khdrbs3Q9R226 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Khdrbs3Q9R226 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.83■□□□□ 0.92
Khdrbs3Q9R226 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdrbs3Q9R226 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdrbs3Q9R226 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdrbs3Q9R226 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Khdrbs3Q9R226 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Khdrbs3Q9R226 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdrbs3Q9R226 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdrbs3Q9R226 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdrbs3Q9R226 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Khdrbs3Q9R226 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdrbs3Q9R226 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Khdrbs3Q9R226 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Khdrbs3Q9R226 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms