Protein–RNA interactions for Protein: Q9JHL1

Slc9a3r2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r2Q9JHL1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc9a3r2Q9JHL1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc9a3r2Q9JHL1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc9a3r2Q9JHL1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc9a3r2Q9JHL1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.71■□□□□ 0.91
Slc9a3r2Q9JHL1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Slc9a3r2Q9JHL1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.91
Slc9a3r2Q9JHL1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc9a3r2Q9JHL1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc9a3r2Q9JHL1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.7■□□□□ 0.9
Slc9a3r2Q9JHL1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc9a3r2Q9JHL1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc9a3r2Q9JHL1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc9a3r2Q9JHL1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Slc9a3r2Q9JHL1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc9a3r2Q9JHL1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Slc9a3r2Q9JHL1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc9a3r2Q9JHL1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Slc9a3r2Q9JHL1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Slc9a3r2Q9JHL1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Slc9a3r2Q9JHL1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slc9a3r2Q9JHL1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slc9a3r2Q9JHL1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Slc9a3r2Q9JHL1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc9a3r2Q9JHL1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc9a3r2Q9JHL1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Slc9a3r2Q9JHL1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slc9a3r2Q9JHL1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc9a3r2Q9JHL1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc9a3r2Q9JHL1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc9a3r2Q9JHL1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Slc9a3r2Q9JHL1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc9a3r2Q9JHL1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc9a3r2Q9JHL1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc9a3r2Q9JHL1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc9a3r2Q9JHL1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Slc9a3r2Q9JHL1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc9a3r2Q9JHL1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc9a3r2Q9JHL1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc9a3r2Q9JHL1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc9a3r2Q9JHL1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc9a3r2Q9JHL1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc9a3r2Q9JHL1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc9a3r2Q9JHL1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc9a3r2Q9JHL1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc9a3r2Q9JHL1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc9a3r2Q9JHL1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.58■□□□□ 0.89
Slc9a3r2Q9JHL1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc9a3r2Q9JHL1 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.58■□□□□ 0.88
Slc9a3r2Q9JHL1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc9a3r2Q9JHL1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc9a3r2Q9JHL1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc9a3r2Q9JHL1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc9a3r2Q9JHL1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc9a3r2Q9JHL1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc9a3r2Q9JHL1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.56■□□□□ 0.88
Slc9a3r2Q9JHL1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc9a3r2Q9JHL1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc9a3r2Q9JHL1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc9a3r2Q9JHL1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc9a3r2Q9JHL1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc9a3r2Q9JHL1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc9a3r2Q9JHL1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.54■□□□□ 0.88
Slc9a3r2Q9JHL1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc9a3r2Q9JHL1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r2Q9JHL1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r2Q9JHL1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc9a3r2Q9JHL1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc9a3r2Q9JHL1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r2Q9JHL1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Slc9a3r2Q9JHL1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r2Q9JHL1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc9a3r2Q9JHL1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc9a3r2Q9JHL1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms