Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh2d6Q9D413 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh2d6Q9D413 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh2d6Q9D413 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.03■□□□□ 0.64
Sh2d6Q9D413 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh2d6Q9D413 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh2d6Q9D413 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh2d6Q9D413 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh2d6Q9D413 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh2d6Q9D413 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh2d6Q9D413 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Sh2d6Q9D413 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.01■□□□□ 0.63
Sh2d6Q9D413 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh2d6Q9D413 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh2d6Q9D413 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh2d6Q9D413 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19■□□□□ 0.63
Sh2d6Q9D413 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh2d6Q9D413 Gm4419-202ENSMUST00000226239 1431 ntBASIC19■□□□□ 0.63
Sh2d6Q9D413 Gm12818-201ENSMUST00000117562 1349 ntBASIC19■□□□□ 0.63
Sh2d6Q9D413 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh2d6Q9D413 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sh2d6Q9D413 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh2d6Q9D413 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Sh2d6Q9D413 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh2d6Q9D413 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh2d6Q9D413 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.98■□□□□ 0.63
Sh2d6Q9D413 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh2d6Q9D413 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh2d6Q9D413 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh2d6Q9D413 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh2d6Q9D413 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh2d6Q9D413 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh2d6Q9D413 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sh2d6Q9D413 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Gm9812-201ENSMUST00000061934 968 ntBASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh2d6Q9D413 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d6Q9D413 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.93■□□□□ 0.62
Sh2d6Q9D413 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d6Q9D413 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
Sh2d6Q9D413 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sh2d6Q9D413 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d6Q9D413 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Scarna2-201ENSMUST00000157560 414 ntBASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sh2d6Q9D413 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d6Q9D413 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d6Q9D413 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d6Q9D413 Gm11175-201ENSMUST00000116172 543 ntBASIC18.89■□□□□ 0.61
Sh2d6Q9D413 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Gm9806-201ENSMUST00000051080 552 ntBASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d6Q9D413 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh2d6Q9D413 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d6Q9D413 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Sh2d6Q9D413 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh2d6Q9D413 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d6Q9D413 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d6Q9D413 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d6Q9D413 Gm11687-201ENSMUST00000118911 886 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms