Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vta1Q9CR26 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vta1Q9CR26 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vta1Q9CR26 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vta1Q9CR26 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Vta1Q9CR26 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.58■■□□□ 1.85
Vta1Q9CR26 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.58■■□□□ 1.85
Vta1Q9CR26 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Vta1Q9CR26 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Vta1Q9CR26 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Vta1Q9CR26 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.56■■□□□ 1.84
Vta1Q9CR26 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vta1Q9CR26 Terc-201ENSMUST00000082862 423 ntBASIC26.56■■□□□ 1.84
Vta1Q9CR26 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Vta1Q9CR26 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Vta1Q9CR26 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vta1Q9CR26 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Vta1Q9CR26 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Vta1Q9CR26 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Vta1Q9CR26 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Vta1Q9CR26 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Vta1Q9CR26 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vta1Q9CR26 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Vta1Q9CR26 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vta1Q9CR26 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Vta1Q9CR26 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Vta1Q9CR26 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.48■■□□□ 1.83
Vta1Q9CR26 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Vta1Q9CR26 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.48■■□□□ 1.83
Vta1Q9CR26 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Vta1Q9CR26 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.47■■□□□ 1.83
Vta1Q9CR26 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Vta1Q9CR26 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Vta1Q9CR26 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Vta1Q9CR26 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vta1Q9CR26 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Vta1Q9CR26 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Vta1Q9CR26 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Vta1Q9CR26 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.46■■□□□ 1.83
Vta1Q9CR26 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.46■■□□□ 1.83
Vta1Q9CR26 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Vta1Q9CR26 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Vta1Q9CR26 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Vta1Q9CR26 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.45■■□□□ 1.82
Vta1Q9CR26 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Vta1Q9CR26 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Vta1Q9CR26 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.43■■□□□ 1.82
Vta1Q9CR26 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vta1Q9CR26 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Vta1Q9CR26 Gm10420-201ENSMUST00000121713 882 ntBASIC26.43■■□□□ 1.82
Vta1Q9CR26 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
Vta1Q9CR26 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Vta1Q9CR26 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.41■■□□□ 1.82
Vta1Q9CR26 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Vta1Q9CR26 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Vta1Q9CR26 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Vta1Q9CR26 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Vta1Q9CR26 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Vta1Q9CR26 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Vta1Q9CR26 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Vta1Q9CR26 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vta1Q9CR26 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.36■■□□□ 1.81
Vta1Q9CR26 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Vta1Q9CR26 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.35■■□□□ 1.81
Vta1Q9CR26 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Vta1Q9CR26 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Vta1Q9CR26 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.33■■□□□ 1.81
Vta1Q9CR26 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vta1Q9CR26 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vta1Q9CR26 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Vta1Q9CR26 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
Vta1Q9CR26 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Vta1Q9CR26 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vta1Q9CR26 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.31■■□□□ 1.8
Vta1Q9CR26 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Vta1Q9CR26 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Vta1Q9CR26 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vta1Q9CR26 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.29■■□□□ 1.8
Vta1Q9CR26 Gm44428-201ENSMUST00000204474 874 ntBASIC26.29■■□□□ 1.8
Vta1Q9CR26 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Vta1Q9CR26 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.29■■□□□ 1.8
Vta1Q9CR26 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.28■■□□□ 1.8
Vta1Q9CR26 Gm5921-201ENSMUST00000075898 882 ntBASIC26.28■■□□□ 1.8
Vta1Q9CR26 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.28■■□□□ 1.8
Vta1Q9CR26 Amer2-203ENSMUST00000225247 2662 ntBASIC26.27■■□□□ 1.8
Vta1Q9CR26 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.27■■□□□ 1.8
Vta1Q9CR26 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Vta1Q9CR26 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vta1Q9CR26 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Vta1Q9CR26 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms