Protein–RNA interactions for Protein: Q99N05

Ms4a4d, Membrane-spanning 4-domains subfamily A member 4D, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a4dQ99N05 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ms4a4dQ99N05 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ms4a4dQ99N05 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ms4a4dQ99N05 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ms4a4dQ99N05 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.41■□□□□ 0.7
Ms4a4dQ99N05 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.41■□□□□ 0.7
Ms4a4dQ99N05 Gm9397-201ENSMUST00000200125 605 ntBASIC19.41■□□□□ 0.7
Ms4a4dQ99N05 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.41■□□□□ 0.7
Ms4a4dQ99N05 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ms4a4dQ99N05 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ms4a4dQ99N05 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ms4a4dQ99N05 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ms4a4dQ99N05 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ms4a4dQ99N05 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
Ms4a4dQ99N05 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ms4a4dQ99N05 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ms4a4dQ99N05 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ms4a4dQ99N05 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ms4a4dQ99N05 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ms4a4dQ99N05 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ms4a4dQ99N05 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ms4a4dQ99N05 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ms4a4dQ99N05 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ms4a4dQ99N05 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ms4a4dQ99N05 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ms4a4dQ99N05 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ms4a4dQ99N05 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ms4a4dQ99N05 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.32■□□□□ 0.68
Ms4a4dQ99N05 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.32■□□□□ 0.68
Ms4a4dQ99N05 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ms4a4dQ99N05 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ms4a4dQ99N05 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.31■□□□□ 0.68
Ms4a4dQ99N05 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ms4a4dQ99N05 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ms4a4dQ99N05 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ms4a4dQ99N05 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ms4a4dQ99N05 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ms4a4dQ99N05 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ms4a4dQ99N05 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.29■□□□□ 0.68
Ms4a4dQ99N05 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ms4a4dQ99N05 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ms4a4dQ99N05 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ms4a4dQ99N05 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ms4a4dQ99N05 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ms4a4dQ99N05 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
Ms4a4dQ99N05 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ms4a4dQ99N05 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ms4a4dQ99N05 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ms4a4dQ99N05 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ms4a4dQ99N05 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.27■□□□□ 0.68
Ms4a4dQ99N05 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ms4a4dQ99N05 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ms4a4dQ99N05 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Ms4a4dQ99N05 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a4dQ99N05 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a4dQ99N05 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a4dQ99N05 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ms4a4dQ99N05 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a4dQ99N05 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a4dQ99N05 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ms4a4dQ99N05 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ms4a4dQ99N05 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ms4a4dQ99N05 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ms4a4dQ99N05 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Ms4a4dQ99N05 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.23■□□□□ 0.67
Ms4a4dQ99N05 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ms4a4dQ99N05 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ms4a4dQ99N05 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ms4a4dQ99N05 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ms4a4dQ99N05 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a4dQ99N05 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a4dQ99N05 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ms4a4dQ99N05 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms