Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.81■■■□□ 2.2
StrcQ8VIM6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
StrcQ8VIM6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
StrcQ8VIM6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
StrcQ8VIM6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
StrcQ8VIM6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
StrcQ8VIM6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
StrcQ8VIM6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
StrcQ8VIM6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
StrcQ8VIM6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
StrcQ8VIM6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
StrcQ8VIM6 Terc-201ENSMUST00000082862 423 ntBASIC28.76■■■□□ 2.19
StrcQ8VIM6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
StrcQ8VIM6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
StrcQ8VIM6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
StrcQ8VIM6 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.73■■■□□ 2.19
StrcQ8VIM6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
StrcQ8VIM6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
StrcQ8VIM6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
StrcQ8VIM6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.71■■■□□ 2.19
StrcQ8VIM6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.71■■■□□ 2.19
StrcQ8VIM6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
StrcQ8VIM6 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.7■■■□□ 2.18
StrcQ8VIM6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.69■■■□□ 2.18
StrcQ8VIM6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
StrcQ8VIM6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.69■■■□□ 2.18
StrcQ8VIM6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
StrcQ8VIM6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
StrcQ8VIM6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
StrcQ8VIM6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
StrcQ8VIM6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
StrcQ8VIM6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.66■■■□□ 2.18
StrcQ8VIM6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.65■■■□□ 2.18
StrcQ8VIM6 Gm43566-201ENSMUST00000196851 808 ntBASIC28.65■■■□□ 2.18
StrcQ8VIM6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
StrcQ8VIM6 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.65■■■□□ 2.18
StrcQ8VIM6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
StrcQ8VIM6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
StrcQ8VIM6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
StrcQ8VIM6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.65■■■□□ 2.18
StrcQ8VIM6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
StrcQ8VIM6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
StrcQ8VIM6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
StrcQ8VIM6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.64■■■□□ 2.17
StrcQ8VIM6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
StrcQ8VIM6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
StrcQ8VIM6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.63■■■□□ 2.17
StrcQ8VIM6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
StrcQ8VIM6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.63■■■□□ 2.17
StrcQ8VIM6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Gm13238-201ENSMUST00000117655 780 ntBASIC28.62■■■□□ 2.17
StrcQ8VIM6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
StrcQ8VIM6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
StrcQ8VIM6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
StrcQ8VIM6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
StrcQ8VIM6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
StrcQ8VIM6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
StrcQ8VIM6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.59■■■□□ 2.17
StrcQ8VIM6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
StrcQ8VIM6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.58■■■□□ 2.17
StrcQ8VIM6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
StrcQ8VIM6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
StrcQ8VIM6 Gm15820-201ENSMUST00000201566 728 ntBASIC28.57■■■□□ 2.16
StrcQ8VIM6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
StrcQ8VIM6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
StrcQ8VIM6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
StrcQ8VIM6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
StrcQ8VIM6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
StrcQ8VIM6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.54■■■□□ 2.16
StrcQ8VIM6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
StrcQ8VIM6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.54■■■□□ 2.16
StrcQ8VIM6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.53■■■□□ 2.16
StrcQ8VIM6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
StrcQ8VIM6 Gm14117-201ENSMUST00000122417 843 ntBASIC28.53■■■□□ 2.16
StrcQ8VIM6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.52■■■□□ 2.16
StrcQ8VIM6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
StrcQ8VIM6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
StrcQ8VIM6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
StrcQ8VIM6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
StrcQ8VIM6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.51■■■□□ 2.15
StrcQ8VIM6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
StrcQ8VIM6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
StrcQ8VIM6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.5■■■□□ 2.15
StrcQ8VIM6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms