Protein–RNA interactions for Protein: Q8R493

Chrnb4, Neuronal acetylcholine receptor subunit beta-4, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrnb4Q8R493 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chrnb4Q8R493 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Chrnb4Q8R493 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrnb4Q8R493 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrnb4Q8R493 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chrnb4Q8R493 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.24■□□□□ 0.83
Chrnb4Q8R493 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chrnb4Q8R493 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chrnb4Q8R493 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrnb4Q8R493 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chrnb4Q8R493 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Chrnb4Q8R493 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chrnb4Q8R493 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chrnb4Q8R493 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chrnb4Q8R493 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chrnb4Q8R493 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrnb4Q8R493 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chrnb4Q8R493 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chrnb4Q8R493 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrnb4Q8R493 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chrnb4Q8R493 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chrnb4Q8R493 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 Gm11599-201ENSMUST00000118720 878 ntBASIC20.18■□□□□ 0.82
Chrnb4Q8R493 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chrnb4Q8R493 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrnb4Q8R493 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chrnb4Q8R493 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrnb4Q8R493 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chrnb4Q8R493 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrnb4Q8R493 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Chrnb4Q8R493 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrnb4Q8R493 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Chrnb4Q8R493 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chrnb4Q8R493 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chrnb4Q8R493 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrnb4Q8R493 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Chrnb4Q8R493 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Chrnb4Q8R493 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chrnb4Q8R493 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chrnb4Q8R493 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chrnb4Q8R493 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chrnb4Q8R493 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chrnb4Q8R493 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrnb4Q8R493 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chrnb4Q8R493 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chrnb4Q8R493 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chrnb4Q8R493 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chrnb4Q8R493 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.08■□□□□ 0.81
Chrnb4Q8R493 Gm4799-201ENSMUST00000095396 657 ntBASIC20.08■□□□□ 0.81
Chrnb4Q8R493 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chrnb4Q8R493 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.06■□□□□ 0.8
Chrnb4Q8R493 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chrnb4Q8R493 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.06■□□□□ 0.8
Chrnb4Q8R493 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.06■□□□□ 0.8
Chrnb4Q8R493 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chrnb4Q8R493 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Chrnb4Q8R493 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chrnb4Q8R493 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chrnb4Q8R493 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Chrnb4Q8R493 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.05■□□□□ 0.8
Chrnb4Q8R493 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrnb4Q8R493 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms