Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cuedc1Q8R3V6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cuedc1Q8R3V6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cuedc1Q8R3V6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cuedc1Q8R3V6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cuedc1Q8R3V6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cuedc1Q8R3V6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 Gm45364-201ENSMUST00000210883 159 ntBASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cuedc1Q8R3V6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cuedc1Q8R3V6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.62■□□□□ 0.89
Cuedc1Q8R3V6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cuedc1Q8R3V6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cuedc1Q8R3V6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cuedc1Q8R3V6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Gm27502-201ENSMUST00000183495 199 ntBASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cuedc1Q8R3V6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cuedc1Q8R3V6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cuedc1Q8R3V6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cuedc1Q8R3V6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cuedc1Q8R3V6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cuedc1Q8R3V6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cuedc1Q8R3V6 Gm14523-201ENSMUST00000117260 558 ntBASIC20.59■□□□□ 0.89
Cuedc1Q8R3V6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cuedc1Q8R3V6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cuedc1Q8R3V6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
Cuedc1Q8R3V6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cuedc1Q8R3V6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
Cuedc1Q8R3V6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cuedc1Q8R3V6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cuedc1Q8R3V6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cuedc1Q8R3V6 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.56■□□□□ 0.88
Cuedc1Q8R3V6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cuedc1Q8R3V6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Cuedc1Q8R3V6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cuedc1Q8R3V6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cuedc1Q8R3V6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.55■□□□□ 0.88
Cuedc1Q8R3V6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
Cuedc1Q8R3V6 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.54■□□□□ 0.88
Cuedc1Q8R3V6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Gm37136-201ENSMUST00000194368 194 ntBASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Gm5812-201ENSMUST00000061073 957 ntBASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cuedc1Q8R3V6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.52■□□□□ 0.88
Cuedc1Q8R3V6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cuedc1Q8R3V6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cuedc1Q8R3V6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Gm22567-201ENSMUST00000175542 342 ntBASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cuedc1Q8R3V6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cuedc1Q8R3V6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cuedc1Q8R3V6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cuedc1Q8R3V6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cuedc1Q8R3V6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cuedc1Q8R3V6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cuedc1Q8R3V6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cuedc1Q8R3V6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Cuedc1Q8R3V6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Cuedc1Q8R3V6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cuedc1Q8R3V6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cuedc1Q8R3V6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cuedc1Q8R3V6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cuedc1Q8R3V6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cuedc1Q8R3V6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cuedc1Q8R3V6 Gm5921-201ENSMUST00000075898 882 ntBASIC20.44■□□□□ 0.86
Cuedc1Q8R3V6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cuedc1Q8R3V6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms