Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.85■■□□□ 1.25
Alms1Q8K4E0 Gm37136-201ENSMUST00000194368 194 ntBASIC22.84■■□□□ 1.25
Alms1Q8K4E0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Alms1Q8K4E0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Alms1Q8K4E0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Alms1Q8K4E0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Alms1Q8K4E0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Alms1Q8K4E0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Alms1Q8K4E0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.82■■□□□ 1.24
Alms1Q8K4E0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Alms1Q8K4E0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Alms1Q8K4E0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Alms1Q8K4E0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.81■■□□□ 1.24
Alms1Q8K4E0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Alms1Q8K4E0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
Alms1Q8K4E0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Alms1Q8K4E0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Alms1Q8K4E0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.8■■□□□ 1.24
Alms1Q8K4E0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Alms1Q8K4E0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Alms1Q8K4E0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Alms1Q8K4E0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.78■■□□□ 1.24
Alms1Q8K4E0 Gm5921-201ENSMUST00000075898 882 ntBASIC22.78■■□□□ 1.24
Alms1Q8K4E0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Gm10420-201ENSMUST00000121713 882 ntBASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Alms1Q8K4E0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.76■■□□□ 1.23
Alms1Q8K4E0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Alms1Q8K4E0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Alms1Q8K4E0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.75■■□□□ 1.23
Alms1Q8K4E0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Gm9812-201ENSMUST00000061934 968 ntBASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Alms1Q8K4E0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Alms1Q8K4E0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.72■■□□□ 1.23
Alms1Q8K4E0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Alms1Q8K4E0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Alms1Q8K4E0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Alms1Q8K4E0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Alms1Q8K4E0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Alms1Q8K4E0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Alms1Q8K4E0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Alms1Q8K4E0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Alms1Q8K4E0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Alms1Q8K4E0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.7■■□□□ 1.22
Alms1Q8K4E0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Alms1Q8K4E0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.7■■□□□ 1.22
Alms1Q8K4E0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Alms1Q8K4E0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
Alms1Q8K4E0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Alms1Q8K4E0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Alms1Q8K4E0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Gm15546-201ENSMUST00000122095 826 ntBASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Alms1Q8K4E0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.67■■□□□ 1.22
Alms1Q8K4E0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.67■■□□□ 1.22
Alms1Q8K4E0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.67■■□□□ 1.22
Alms1Q8K4E0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Alms1Q8K4E0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Alms1Q8K4E0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.66■■□□□ 1.22
Alms1Q8K4E0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Alms1Q8K4E0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.65■■□□□ 1.22
Alms1Q8K4E0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Alms1Q8K4E0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Alms1Q8K4E0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Alms1Q8K4E0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Alms1Q8K4E0 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.62■■□□□ 1.21
Alms1Q8K4E0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alms1Q8K4E0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Alms1Q8K4E0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Alms1Q8K4E0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alms1Q8K4E0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Alms1Q8K4E0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Alms1Q8K4E0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Alms1Q8K4E0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms