Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs1Q8JZK9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgcs1Q8JZK9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.88■■□□□ 1.09
Hmgcs1Q8JZK9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs1Q8JZK9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgcs1Q8JZK9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgcs1Q8JZK9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Hmgcs1Q8JZK9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.86■■□□□ 1.09
Hmgcs1Q8JZK9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs1Q8JZK9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Hmgcs1Q8JZK9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs1Q8JZK9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgcs1Q8JZK9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgcs1Q8JZK9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.83■■□□□ 1.09
Hmgcs1Q8JZK9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hmgcs1Q8JZK9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hmgcs1Q8JZK9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hmgcs1Q8JZK9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Hmgcs1Q8JZK9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.82■■□□□ 1.08
Hmgcs1Q8JZK9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgcs1Q8JZK9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Hmgcs1Q8JZK9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgcs1Q8JZK9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgcs1Q8JZK9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgcs1Q8JZK9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgcs1Q8JZK9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgcs1Q8JZK9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgcs1Q8JZK9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.79■■□□□ 1.08
Hmgcs1Q8JZK9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.79■■□□□ 1.08
Hmgcs1Q8JZK9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgcs1Q8JZK9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.78■■□□□ 1.08
Hmgcs1Q8JZK9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgcs1Q8JZK9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgcs1Q8JZK9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgcs1Q8JZK9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Hmgcs1Q8JZK9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgcs1Q8JZK9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgcs1Q8JZK9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgcs1Q8JZK9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Hmgcs1Q8JZK9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Gm6821-201ENSMUST00000107540 542 ntBASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgcs1Q8JZK9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgcs1Q8JZK9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgcs1Q8JZK9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgcs1Q8JZK9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.74■■□□□ 1.07
Hmgcs1Q8JZK9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgcs1Q8JZK9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Hmgcs1Q8JZK9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.73■■□□□ 1.07
Hmgcs1Q8JZK9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgcs1Q8JZK9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgcs1Q8JZK9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgcs1Q8JZK9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgcs1Q8JZK9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hmgcs1Q8JZK9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.7■■□□□ 1.07
Hmgcs1Q8JZK9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Hmgcs1Q8JZK9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcs1Q8JZK9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcs1Q8JZK9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.7■■□□□ 1.06
Hmgcs1Q8JZK9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Hmgcs1Q8JZK9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.69■■□□□ 1.06
Hmgcs1Q8JZK9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcs1Q8JZK9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgcs1Q8JZK9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcs1Q8JZK9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcs1Q8JZK9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgcs1Q8JZK9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgcs1Q8JZK9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgcs1Q8JZK9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgcs1Q8JZK9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcs1Q8JZK9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcs1Q8JZK9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgcs1Q8JZK9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcs1Q8JZK9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgcs1Q8JZK9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Hmgcs1Q8JZK9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.63■■□□□ 1.05
Hmgcs1Q8JZK9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms