Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sfr1Q8BP27 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.22■■□□□ 1.31
Sfr1Q8BP27 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sfr1Q8BP27 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sfr1Q8BP27 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sfr1Q8BP27 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sfr1Q8BP27 Mir3960-201ENSMUST00000198213 73 ntBASIC23.21■■□□□ 1.31
Sfr1Q8BP27 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sfr1Q8BP27 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Sfr1Q8BP27 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sfr1Q8BP27 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.2■■□□□ 1.3
Sfr1Q8BP27 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Sfr1Q8BP27 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sfr1Q8BP27 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sfr1Q8BP27 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sfr1Q8BP27 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Sfr1Q8BP27 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sfr1Q8BP27 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sfr1Q8BP27 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sfr1Q8BP27 Gm6311-201ENSMUST00000073790 878 ntBASIC23.18■■□□□ 1.3
Sfr1Q8BP27 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.17■■□□□ 1.3
Sfr1Q8BP27 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sfr1Q8BP27 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.17■■□□□ 1.3
Sfr1Q8BP27 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Sfr1Q8BP27 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.16■■□□□ 1.3
Sfr1Q8BP27 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sfr1Q8BP27 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.15■■□□□ 1.3
Sfr1Q8BP27 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.15■■□□□ 1.3
Sfr1Q8BP27 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sfr1Q8BP27 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sfr1Q8BP27 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sfr1Q8BP27 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Sfr1Q8BP27 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.13■■□□□ 1.29
Sfr1Q8BP27 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.12■■□□□ 1.29
Sfr1Q8BP27 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
Sfr1Q8BP27 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.11■■□□□ 1.29
Sfr1Q8BP27 Gm45364-201ENSMUST00000210883 159 ntBASIC23.1■■□□□ 1.29
Sfr1Q8BP27 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sfr1Q8BP27 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sfr1Q8BP27 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sfr1Q8BP27 Gm9812-201ENSMUST00000061934 968 ntBASIC23.08■■□□□ 1.29
Sfr1Q8BP27 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sfr1Q8BP27 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sfr1Q8BP27 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sfr1Q8BP27 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sfr1Q8BP27 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sfr1Q8BP27 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sfr1Q8BP27 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sfr1Q8BP27 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.06■■□□□ 1.28
Sfr1Q8BP27 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sfr1Q8BP27 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sfr1Q8BP27 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sfr1Q8BP27 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Sfr1Q8BP27 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sfr1Q8BP27 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sfr1Q8BP27 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sfr1Q8BP27 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sfr1Q8BP27 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Sfr1Q8BP27 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sfr1Q8BP27 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sfr1Q8BP27 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.02■■□□□ 1.28
Sfr1Q8BP27 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Sfr1Q8BP27 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sfr1Q8BP27 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sfr1Q8BP27 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Sfr1Q8BP27 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sfr1Q8BP27 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sfr1Q8BP27 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sfr1Q8BP27 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Sfr1Q8BP27 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Sfr1Q8BP27 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23■■□□□ 1.27
Sfr1Q8BP27 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23■■□□□ 1.27
Sfr1Q8BP27 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.99■■□□□ 1.27
Sfr1Q8BP27 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Sfr1Q8BP27 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sfr1Q8BP27 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sfr1Q8BP27 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms