Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdhr3Q8BL00 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cdhr3Q8BL00 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdhr3Q8BL00 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cdhr3Q8BL00 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.02■□□□□ 0.8
Cdhr3Q8BL00 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.02■□□□□ 0.79
Cdhr3Q8BL00 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdhr3Q8BL00 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdhr3Q8BL00 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cdhr3Q8BL00 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20■□□□□ 0.79
Cdhr3Q8BL00 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdhr3Q8BL00 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdhr3Q8BL00 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdhr3Q8BL00 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdhr3Q8BL00 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cdhr3Q8BL00 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdhr3Q8BL00 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdhr3Q8BL00 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.97■□□□□ 0.79
Cdhr3Q8BL00 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdhr3Q8BL00 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdhr3Q8BL00 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdhr3Q8BL00 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdhr3Q8BL00 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.94■□□□□ 0.78
Cdhr3Q8BL00 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdhr3Q8BL00 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdhr3Q8BL00 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdhr3Q8BL00 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdhr3Q8BL00 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdhr3Q8BL00 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdhr3Q8BL00 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdhr3Q8BL00 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdhr3Q8BL00 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdhr3Q8BL00 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdhr3Q8BL00 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cdhr3Q8BL00 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdhr3Q8BL00 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdhr3Q8BL00 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdhr3Q8BL00 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cdhr3Q8BL00 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
Cdhr3Q8BL00 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cdhr3Q8BL00 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdhr3Q8BL00 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdhr3Q8BL00 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdhr3Q8BL00 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdhr3Q8BL00 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr3Q8BL00 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cdhr3Q8BL00 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdhr3Q8BL00 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Cdhr3Q8BL00 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdhr3Q8BL00 Nkain2-201ENSMUST00000092602 558 ntBASIC19.83■□□□□ 0.77
Cdhr3Q8BL00 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdhr3Q8BL00 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdhr3Q8BL00 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cdhr3Q8BL00 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdhr3Q8BL00 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdhr3Q8BL00 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms